ID Q7XIP8_ORYSJ Unreviewed; 834 AA.
AC Q7XIP8;
DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2003, sequence version 1.
DT 27-MAR-2024, entry version 151.
DE SubName: Full=Basal transcription factor SNAPc large chain SNAP190-like protein {ECO:0000313|EMBL:BAC79618.1};
DE SubName: Full=Os07g0139500 protein {ECO:0000313|EMBL:BAF20774.1};
GN Name=OJ1417_E01.122 {ECO:0000313|EMBL:BAC79618.1};
GN OrderedLocusNames=Os07g0139500 {ECO:0000313|EMBL:BAF20774.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:BAC79618.1, ECO:0000313|Proteomes:UP000000763};
RN [1] {ECO:0000313|EMBL:BAC79618.1}
RP NUCLEOTIDE SEQUENCE.
RA Sasaki T., Matsumoto T., Yamamoto K.;
RT "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 7, BAC
RT clone:OJ1417_E01.";
RL Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:BAF20774.1, ECO:0000313|Proteomes:UP000000763}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000000763};
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RA Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N.,
RA Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y.,
RA Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N.,
RA Fukunaka R., Hamada M., Harada C., Hayashi A., Hijishita S., Honda M.,
RA Hosokawa S., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M.,
RA Ito K., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K.,
RA Karasawa W., Kurita K., Katagiri S., Kikuta A., Kobayashi H., Kobayashi N.,
RA Machita K., Maehara T., Masukawa M., Mizubayashi T., Mukai Y., Nagasaki H.,
RA Nagata Y., Naito S., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M.,
RA Meguro A., Negishi M., Ohta I., Ohta T., Okamoto M., Ono N., Saji S.,
RA Sakaguchi M., Sakai K., Shibata M., Shimokawa T., Song J., Takazaki Y.,
RA Terasawa K., Tsugane M., Tsuji K., Ueda S., Waki K., Yamagata H.,
RA Yamamoto M., Yamamoto S., Yamane H., Yoshiki S., Yoshihara R., Yukawa K.,
RA Zhong H., Yano M., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Bera J., Fadrosh D., Jin S., Johri S., Kim M.,
RA Overton L., Reardon M., Tsitrin T., Vuong H., Weaver B., Ciecko A.,
RA Tallon L., Jackson J., Pai G., Aken S.V., Utterback T., Reidmuller S.,
RA Feldblyum T., Hsiao J., Zismann V., Iobst S., de Vazeille A.R., Buell C.R.,
RA Ying K., Li Y., Lu T., Huang Y., Zhao Q., Feng Q., Zhang L., Zhu J.,
RA Weng Q., Mu J., Lu Y., Fan D., Liu Y., Guan J., Zhang Y., Yu S., Liu X.,
RA Zhang Y., Hong G., Han B., Choisne N., Demange N., Orjeda G., Samain S.,
RA Cattolico L., Pelletier E., Couloux A., Segurens B., Wincker P., D'Hont A.,
RA Scarpelli C., Weissenbach J., Salanoubat M., Quetier F., Yu Y., Kim H.R.,
RA Rambo T., Currie J., Collura K., Luo M., Yang T., Ammiraju J.S.S.,
RA Engler F., Soderlund C., Wing R.A., Palmer L.E., de la Bastide M.,
RA Spiegel L., Nascimento L., Zutavern T., O'Shaughnessy A., Dike S.,
RA Dedhia N., Preston R., Balija V., McCombie W.R., Chow T., Chen H.,
RA Chung M., Chen C., Shaw J., Wu H., Hsiao K., Chao Y., Chu M., Cheng C.,
RA Hour A., Lee P., Lin S., Lin Y., Liou J., Liu S., Hsing Y., Raghuvanshi S.,
RA Mohanty A., Bharti A.K., Gaur A., Gupta V., Kumar D., Ravi V., Vij S.,
RA Kapur A., Khurana P., Khurana P., Khurana J.P., Tyagi A.K., Gaikwad K.,
RA Singh A., Dalal V., Srivastava S., Dixit A., Pal A.K., Ghazi I.A.,
RA Yadav M., Pandit A., Bhargava A., Sureshbabu K., Batra K., Sharma T.R.,
RA Mohapatra T., Singh N.K., Messing J., Nelson A.B., Fuks G., Kavchok S.,
RA Keizer G., Linton E., Llaca V., Song R., Tanyolac B., Young S., Ho-Il K.,
RA Hahn J.H., Sangsakoo G., Vanavichit A., de Mattos Luiz.A.T., Zimmer P.D.,
RA Malone G., Dellagostin O., de Oliveira A.C., Bevan M., Bancroft I.,
RA Minx P., Cordum H., Wilson R., Cheng Z., Jin W., Jiang J., Leong S.A.,
RA Iwama H., Gojobori T., Itoh T., Niimura Y., Fujii Y., Habara T., Sakai H.,
RA Sato Y., Wilson G., Kumar K., McCouch S., Juretic N., Hoen D., Wright S.,
RA Bruskiewich R., Bureau T., Miyao A., Hirochika H., Nishikawa T.,
RA Kadowaki K., Sugiura M., Burr B., Sasaki T.;
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3] {ECO:0000313|EMBL:BAF20774.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=16381971; DOI=10.1093/nar/gkj094;
RA Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T.,
RA Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T.,
RA Gojobori T., Sasaki T.;
RT "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp.
RT japonica genome information.";
RL Nucleic Acids Res. 34:D741-D744(2006).
RN [4] {ECO:0000313|EMBL:BAF20774.1}
RP NUCLEOTIDE SEQUENCE.
RG The Rice Annotation Project (RAP);
RA Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B.,
RA Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., Burr F.,
RA Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., Harada E.,
RA Hiraki A.T., Hirochika H., Hoen D., Hokari H., Hosokawa S., Hsing Y.,
RA Ikawa H., Ikeo K., Imanishi T., Ito Y., Jaiswal P., Kanno M., Kawahara Y.,
RA Kawamura T., Kawashima H., Khurana J.P., Kikuchi S., Komatsu S.,
RA Koyanagi K.O., Kubooka H., Lieberherr D., Lin Y.C., Lonsdale D.,
RA Matsumoto T., Matsuya A., McCombie W.R., Messing J., Miyao A., Mulder N.,
RA Nagamura Y., Nam J., Namiki N., Numa H., Nurimoto S., O'donovan C.,
RA Ohyanagi H., Okido T., Oota S., Osato N., Palmer L.E., Quetier F.,
RA Raghuvanshi S., Saichi N., Sakai H., Sakai Y., Sakata K., Sakurai T.,
RA Sato F., Sato Y., Schoof H., Seki M., Shibata M., Shimizu Y., Shinozaki K.,
RA Shinso Y., Singh N.K., Smith-White B., Takeda J., Tanino M., Tatusova T.,
RA Thongjuea S., Todokoro F., Tsugane M., Tyagi A.K., Vanavichit A., Wang A.,
RA Wing R.A., Yamaguchi K., Yamamoto M., Yamamoto N., Yu Y., Zhang H.,
RA Zhao Q., Higo K., Burr B., Gojobori T., Sasaki T.;
RT "Curated Genome Annotation of Oryza sativa ssp. japonica and Comparative
RT Genome Analysis with Arabidopsis thaliana.";
RL Genome Res. 17:175-183(2007).
RN [5] {ECO:0000313|EMBL:BAF20774.1}
RP NUCLEOTIDE SEQUENCE.
RG The Rice Annotation Project (RAP);
RA Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., Numa H.,
RA Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., Habara T.,
RA Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H., Matsuya A.,
RA Nakaoka H., Saichi N., Sanbonmatsu R., Sato Y., Shinso Y., Suzuki M.,
RA Takeda J., Tanino M., Todokoro F., Yamaguchi K., Yamamoto N., Yamasaki C.,
RA Imanishi T., Okido T., Tada M., Ikeo K., Tateno Y., Gojobori T., Lin Y.C.,
RA Wei F.J., Hsing Y.I., Zhao Q., Han B., Kramer M.R., McCombie R.W.,
RA Lonsdale D., O'Donovan C.C., Whitfield E.J., Apweiler R., Koyanagi K.O.,
RA Khurana J.P., Raghuvanshi S., Singh N.K., Tyagi A.K., Haberer G.,
RA Fujisawa M., Hosokawa S., Ito Y., Ikawa H., Shibata M., Yamamoto M.,
RA Bruskiewich R.M., Hoen D.R., Bureau TE., Namiki N., Ohyanagi H., Sakai Y.,
RA Nobushima S., Sakata K., Barrero R.A., Sato Y., Souvorov A.,
RA Smith-White B., Tatusova T., An S., An G., OOta S., Fuks G., Messing J.,
RA Christie K.R., Lieberherr D., Kim H., Zuccolo A., Wing R.A., Nobuta K.,
RA Green P.J., Lu C., Meyers BC., Chaparro C., Piegu B., Panaud O.,
RA Echeverria M.;
RT "The Rice Annotation Project Database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6] {ECO:0000313|Proteomes:UP000000763}
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000000763};
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [7] {ECO:0000313|EMBL:BAF20774.1}
RP NUCLEOTIDE SEQUENCE.
RG IRGSP(International Rice Genome Sequencing Project);
RT "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 7.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [8] {ECO:0000313|EMBL:BAF20774.1}
RP NUCLEOTIDE SEQUENCE.
RG The Rice Annotation Project (RAP);
RT "The Second Rice Annotation Project Meeting (RAP2).";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AP003829; BAC79618.1; -; Genomic_DNA.
DR EMBL; AP008213; BAF20774.1; -; Genomic_DNA.
DR RefSeq; XP_015647438.1; XM_015791952.1.
DR RefSeq; XP_015647439.1; XM_015791953.1.
DR RefSeq; XP_015647441.1; XM_015791955.1.
DR AlphaFoldDB; Q7XIP8; -.
DR SMR; Q7XIP8; -.
DR Proteomes; UP000000763; Chromosome 7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00167; SANT; 5.
DR Gene3D; 1.10.10.60; Homeodomain-like; 5.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017930; Myb_dom.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR46621; SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4; 1.
DR PANTHER; PTHR46621:SF1; SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4; 1.
DR Pfam; PF00249; Myb_DNA-binding; 4.
DR SMART; SM00717; SANT; 5.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS51294; HTH_MYB; 4.
DR PROSITE; PS50090; MYB_LIKE; 5.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242}.
FT DOMAIN 151..249
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 250..306
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 250..302
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 311..357
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 311..353
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 355..406
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 361..410
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT DOMAIN 407..458
FT /note="Myb-like"
FT /evidence="ECO:0000259|PROSITE:PS50090"
FT DOMAIN 413..462
FT /note="HTH myb-type"
FT /evidence="ECO:0000259|PROSITE:PS51294"
FT REGION 487..615
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 640..770
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 802..834
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 507..527
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 531..565
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 579..596
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 640..664
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 679..698
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 834 AA; 92425 MW; 1E149FEEA3C782ED CRC64;
MNTKTEASKE GSGNIFGNEL DEEFDAEKHN KEATTRTGFP KAALLLVDAL KKNRACQKFI
RRKMITIEAK IEENKDLRDR VKCLLDYQLS CRKAFGKILC QKEDPRVRLI SSRKPCAQST
KNKDKKTPAL FLGPADNPHV SKYKMVLKQL PMSLQKQPWS DVEKEKLAKG IKQQYQEALI
LNSINKGSST GDFSAVDMAY ALTNTAGNFE VTPESLRSVL PLINWDKIAA MYLPGRSGAE
CESRWLNFDD PLISHNAWTA REEKRLILTV QQQGMNNWIN IAVTLGTHRT PFQCLVRYQR
SLNHCILNKD WAEEEDLQLQ AAVNTFGTNW QLVSASMDGR TGNQCSNRWR KTLNPERSRV
GRWSLDEDKR LMVAVKLFGS GSWNKIAQFI PGRTQSQCNE RWRNVLDPDI DLGEWRPEED
SILLASVDEF GPCWSKIAGA KIPHRTDNMC LRRWRKLCQD KLPSVKAAQQ IKKSILQCNF
VDRETERPAI GPSDLMPLVR SKVDGSDENT VSAKVRKPRK RSRIPCEDNV LPGDTSNSSP
SMNLPLSESI DAEAAVNTTT ANSKKKPSRS RSKKQTDENL AVCDVNNSSN CSSGARKRKR
SITDKNQVVQ KKMKGSISGD NEAVVETVGT ISADNEVATK RKTGSTSVGE EGTTKKTTRG
SLSGKGEVNK RMRGSISGVQ KGATKQRMRG SVSTDNHGAV MKSKRAPSRK SAEENSKADS
MANAAFGSDL PTVASEDRDA NNGNVKNGRL KSMPRPKQIN MTEGSADKFS TSTRLADCMS
FGRINGSSRV ARHLCVSVKP LSNMIQSNGP SDVSAKDPTS AETDPTSVEN SNTA
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