ID Q80UK6_MOUSE Unreviewed; 236 AA.
AC Q80UK6;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 24-JAN-2024, entry version 91.
DE SubName: Full=X-linked lymphocyte-regulated 5A {ECO:0000313|EMBL:AAH51681.1};
GN Name=Xlr5a {ECO:0000313|EMBL:AAH51681.1, ECO:0000313|MGI:MGI:3574108};
GN Synonyms=Xlr5d {ECO:0000313|MGI:MGI:3574108};
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090 {ECO:0000313|EMBL:AAH51681.1};
RN [1] {ECO:0000313|EMBL:AAH51681.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=B5/EGFP transgenic ICR mice {ECO:0000313|EMBL:AAH51681.1};
RC TISSUE=Trophoblast Stem Cell {ECO:0000313|EMBL:AAH51681.1};
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RA Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H.,
RA Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M.,
RA Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.,
RA Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F.,
RA Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T.,
RA Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F.,
RA Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E.,
RA Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y.,
RA Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E.,
RA Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y.,
RA Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W.,
RA Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J.,
RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J.,
RA Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W.,
RA Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J.,
RA Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I.,
RA Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U.,
RA Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A.,
RA Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SIMILARITY: Belongs to the XLR/SYCP3 family.
CC {ECO:0000256|ARBA:ARBA00010283}.
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DR EMBL; BC051681; AAH51681.1; -; mRNA.
DR AlphaFoldDB; Q80UK6; -.
DR AGR; MGI:3574108; -.
DR MGI; MGI:3574108; Xlr5a.
DR ChiTaRS; Xlr5a; mouse.
DR GO; GO:0000795; C:synaptonemal complex; IBA:GO_Central.
DR GO; GO:0051321; P:meiotic cell cycle; IBA:GO_Central.
DR GO; GO:0007286; P:spermatid development; IBA:GO_Central.
DR InterPro; IPR006888; XLR/SYCP3/FAM9_dom.
DR PANTHER; PTHR19368:SF9; X-LINKED LYMPHOCYTE-REGULATED 5A-RELATED; 1.
DR PANTHER; PTHR19368; XLR/SCP3/FAM9; 1.
DR Pfam; PF04803; Cor1; 1.
PE 2: Evidence at transcript level;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 78..206
FT /note="XLR/SYCP3/FAM9"
FT /evidence="ECO:0000259|Pfam:PF04803"
FT REGION 1..75
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 151..178
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..33
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..75
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 236 AA; 27217 MW; 0228B169EC9D4A5E CRC64;
MSNKEQKAMK KSGKYQRVHK TLPSDDFKNS DEVNPADKPA VGTSGMGSHS SGSDMQEARE
PVQKKMQDFK GDDGTGLLME KKKQFEEDVN ASFRSLNENL QSILKAQQNS RQELKSLYCE
RFGSVYHNWL VEMDRTRDQE EYFSFITQQQ MKILQTAIED HETKLKNAKD MCDTFLKKAN
DLSKRQKTFI GGQHTIVEKE ISKVQNRVIM ETQDQDISMV ETYLQSLIHE SSEETI
//
