ID Q88AV8_PSESM Unreviewed; 377 AA.
AC Q88AV8;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 24-JAN-2024, entry version 103.
DE SubName: Full=DNA-binding protein {ECO:0000313|EMBL:AAO53821.1};
GN OrderedLocusNames=PSPTO_0275 {ECO:0000313|EMBL:AAO53821.1};
OS Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=223283 {ECO:0000313|EMBL:AAO53821.1, ECO:0000313|Proteomes:UP000002515};
RN [1] {ECO:0000313|EMBL:AAO53821.1, ECO:0000313|Proteomes:UP000002515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-871 / DC3000 {ECO:0000313|Proteomes:UP000002515};
RX PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA Gwinn M.L., Dodson R.J., Deboy R.T., Durkin A.S., Kolonay J.F., Madupu R.,
RA Daugherty S., Brinkac L., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.,
RA Zafar N., Zhou L., Liu J., Yuan Q., Khouri H., Fedorova N., Tran B.,
RA Russell D., Berry K., Utterback T., Van Aken S.E., Feldblyum T.V.,
RA D'Ascenzo M., Deng W.L., Ramos A.R., Alfano J.R., Cartinhour S.,
RA Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B.,
RA Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A.;
RT "The complete genome sequence of the Arabidopsis and tomato pathogen
RT Pseudomonas syringae pv. tomato DC3000.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; AE016853; AAO53821.1; -; Genomic_DNA.
DR RefSeq; NP_790126.1; NC_004578.1.
DR RefSeq; WP_011103065.1; NC_004578.1.
DR AlphaFoldDB; Q88AV8; -.
DR GeneID; 1181883; -.
DR KEGG; pst:PSPTO_0275; -.
DR PATRIC; fig|223283.9.peg.288; -.
DR eggNOG; COG2856; Bacteria.
DR HOGENOM; CLU_057454_1_0_6; -.
DR OMA; LAHIWIG; -.
DR OrthoDB; 9796786at2; -.
DR PhylomeDB; Q88AV8; -.
DR Proteomes; UP000002515; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.10.2910; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR43236; ANTITOXIN HIGA1; 1.
DR PANTHER; PTHR43236:SF2; BLL1668 PROTEIN; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000313|EMBL:AAO53821.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000002515}.
FT DOMAIN 16..66
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 377 AA; 42007 MW; 69D2DA2C74F459AD CRC64;
MSQAAFVNPS ILTWSRERAG LSAAQVARKL PVKPERVEEW ESGEARPTFL QAQKWASVAH
VPFGFLFLLQ PPVEQLPLPD LRTVGNSAPL RPSLELLDTV KDAIRKQDWY LEYLHVQERQ
PLPFVGRFDS RTPVKTVVSD IRQTLGVDPE KSRLDYDKYS RALIDAAEVA GVLVMRSGIA
LGNTHRKLEV SEFRGFAISN PLAPVVFINS SDAPTARLFT LMHELAHIWI GSSGVSDAGT
ANGREEERFC NAVAGEFLVP EALFRTVWSA SIEWESNLAT LATRFHVSKL VIGRRAMDLG
YVTQEQYGAY YQKILKAFRD EKGGAEDYYR NATAKNSTRL SKAVLTETLS GRMLLREAGN
LLGVQPAKLR TLAAEHL
//