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Database: UniProt
Entry: Q88AV8_PSESM
LinkDB: Q88AV8_PSESM
Original site: Q88AV8_PSESM 
ID   Q88AV8_PSESM            Unreviewed;       377 AA.
AC   Q88AV8;
DT   01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT   01-JUN-2003, sequence version 1.
DT   24-JAN-2024, entry version 103.
DE   SubName: Full=DNA-binding protein {ECO:0000313|EMBL:AAO53821.1};
GN   OrderedLocusNames=PSPTO_0275 {ECO:0000313|EMBL:AAO53821.1};
OS   Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=223283 {ECO:0000313|EMBL:AAO53821.1, ECO:0000313|Proteomes:UP000002515};
RN   [1] {ECO:0000313|EMBL:AAO53821.1, ECO:0000313|Proteomes:UP000002515}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-871 / DC3000 {ECO:0000313|Proteomes:UP000002515};
RX   PubMed=12928499; DOI=10.1073/pnas.1731982100;
RA   Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T.,
RA   Gwinn M.L., Dodson R.J., Deboy R.T., Durkin A.S., Kolonay J.F., Madupu R.,
RA   Daugherty S., Brinkac L., Beanan M.J., Haft D.H., Nelson W.C., Davidsen T.,
RA   Zafar N., Zhou L., Liu J., Yuan Q., Khouri H., Fedorova N., Tran B.,
RA   Russell D., Berry K., Utterback T., Van Aken S.E., Feldblyum T.V.,
RA   D'Ascenzo M., Deng W.L., Ramos A.R., Alfano J.R., Cartinhour S.,
RA   Chatterjee A.K., Delaney T.P., Lazarowitz S.G., Martin G.B.,
RA   Schneider D.J., Tang X., Bender C.L., White O., Fraser C.M., Collmer A.;
RT   "The complete genome sequence of the Arabidopsis and tomato pathogen
RT   Pseudomonas syringae pv. tomato DC3000.";
RL   Proc. Natl. Acad. Sci. U.S.A. 100:10181-10186(2003).
CC   -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC       regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR   EMBL; AE016853; AAO53821.1; -; Genomic_DNA.
DR   RefSeq; NP_790126.1; NC_004578.1.
DR   RefSeq; WP_011103065.1; NC_004578.1.
DR   AlphaFoldDB; Q88AV8; -.
DR   GeneID; 1181883; -.
DR   KEGG; pst:PSPTO_0275; -.
DR   PATRIC; fig|223283.9.peg.288; -.
DR   eggNOG; COG2856; Bacteria.
DR   HOGENOM; CLU_057454_1_0_6; -.
DR   OMA; LAHIWIG; -.
DR   OrthoDB; 9796786at2; -.
DR   PhylomeDB; Q88AV8; -.
DR   Proteomes; UP000002515; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.10.2910; -; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010359; IrrE_HExxH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   PANTHER; PTHR43236; ANTITOXIN HIGA1; 1.
DR   PANTHER; PTHR43236:SF2; BLL1668 PROTEIN; 1.
DR   Pfam; PF01381; HTH_3; 1.
DR   Pfam; PF06114; Peptidase_M78; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   3: Inferred from homology;
KW   DNA-binding {ECO:0000313|EMBL:AAO53821.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002515}.
FT   DOMAIN          16..66
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   377 AA;  42007 MW;  69D2DA2C74F459AD CRC64;
     MSQAAFVNPS ILTWSRERAG LSAAQVARKL PVKPERVEEW ESGEARPTFL QAQKWASVAH
     VPFGFLFLLQ PPVEQLPLPD LRTVGNSAPL RPSLELLDTV KDAIRKQDWY LEYLHVQERQ
     PLPFVGRFDS RTPVKTVVSD IRQTLGVDPE KSRLDYDKYS RALIDAAEVA GVLVMRSGIA
     LGNTHRKLEV SEFRGFAISN PLAPVVFINS SDAPTARLFT LMHELAHIWI GSSGVSDAGT
     ANGREEERFC NAVAGEFLVP EALFRTVWSA SIEWESNLAT LATRFHVSKL VIGRRAMDLG
     YVTQEQYGAY YQKILKAFRD EKGGAEDYYR NATAKNSTRL SKAVLTETLS GRMLLREAGN
     LLGVQPAKLR TLAAEHL
//
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