ID Q8D0F2_YERPE Unreviewed; 341 AA.
AC Q8D0F2; Q74U43;
DT 01-MAR-2003, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2003, sequence version 1.
DT 27-MAR-2024, entry version 123.
DE SubName: Full=Transcriptional regulators {ECO:0000313|EMBL:AAS62126.1};
GN Name=rpiR4 {ECO:0000313|EMBL:AAS62126.1};
GN OrderedLocusNames=y2245 {ECO:0000313|EMBL:AAM85805.1}, YP_1908
GN {ECO:0000313|EMBL:AAS62126.1};
OS Yersinia pestis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=632 {ECO:0000313|EMBL:AAM85805.1, ECO:0000313|Proteomes:UP000002490};
RN [1] {ECO:0000313|EMBL:AAM85805.1, ECO:0000313|Proteomes:UP000002490}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KIM {ECO:0000313|EMBL:AAM85805.1}, and KIM10+ / Biovar
RC Mediaevalis {ECO:0000313|Proteomes:UP000002490};
RX PubMed=12142430; DOI=10.1128/JB.184.16.4601-4611.2002;
RA Deng W., Burland V., Plunkett G.III., Boutin A., Mayhew G.F., Liss P.,
RA Perna N.T., Rose D.J., Mau B., Zhou S., Schwartz D.C., Fetherston J.D.,
RA Lindler L.E., Brubaker R.R., Plana G.V., Straley S.C., McDonough K.A.,
RA Nilles M.L., Matson J.S., Blattner F.R., Perry R.D.;
RT "Genome sequence of Yersinia pestis KIM.";
RL J. Bacteriol. 184:4601-4611(2002).
RN [2] {ECO:0000313|EMBL:AAS62126.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=91001 {ECO:0000313|EMBL:AAS62126.1};
RA Song Y., Tong Z., Wang L., Han Y., Zhang J., Pei D., Wang J., Zhou D.,
RA Han Y., Pang X., Zhai J., Chen F., Qin H., Wang J., Li S., Guo Z., Ye C.,
RA Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.;
RL Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000001019}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=91001 / Biovar Mediaevalis {ECO:0000313|Proteomes:UP000001019};
RX PubMed=15368893; DOI=10.1093/dnares/11.3.179;
RA Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D.,
RA Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L.,
RA Dai R., Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H.,
RA Wang J., Huang P., Yang R.;
RT "Complete genome sequence of Yersinia pestis strain 91001, an isolate
RT avirulent to humans.";
RL DNA Res. 11:179-197(2004).
RN [4] {ECO:0000313|EMBL:AAS62126.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=91001 {ECO:0000313|EMBL:AAS62126.1};
RA Yiqing M.;
RT "Reannotation of Yersinia pestis strain 91001 based on omics data.";
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AE009952; AAM85805.1; -; Genomic_DNA.
DR EMBL; AE017042; AAS62126.1; -; Genomic_DNA.
DR AlphaFoldDB; Q8D0F2; -.
DR EnsemblBacteria; AAS62126; AAS62126; YP_1908.
DR KEGG; ypk:y2245; -.
DR KEGG; ypm:YP_1908; -.
DR HOGENOM; CLU_055769_0_0_6; -.
DR OMA; VPFIHRS; -.
DR Proteomes; UP000001019; Chromosome.
DR Proteomes; UP000002490; Chromosome.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR HEXR-RELATED; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
FT DOMAIN 53..129
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 173..312
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
SQ SEQUENCE 341 AA; 38065 MW; 7D51E9B5B6A2644B CRC64;
MKIRHRSYYG EKGLLLTLCH CQRVPARSIF SLNRHRFLLY MKSVKPMGGS RYMNTLENIQ
NSMDLLSKSE RKVAEVILAS PQTAIHSSIA TLAKMANVSE PTVNRFCRRL ETKGFPDFKL
HLAQSLANGT PYVNRNVEED DSVAAYTGKI FESTMASLDR VKNNLDIAAI NRAVDLLTQA
KKISFFGLGS SAAVAHDAMN KFFRFNIPVI YFDDIVMQRM SCMNSSEGDV VVLISHTGRT
KSLVELAQLA RENDAAVIAI TSCDTPLANE ATLSLLLDVP EDTDMYMPMV SRIAQLTLID
VLATGFTLRR GAKFRDNLKR VKEALKESRF DKDSLPVNNG D
//
