ID Q8H7N6_ORYSJ Unreviewed; 595 AA.
AC Q8H7N6;
DT 01-MAR-2003, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2003, sequence version 1.
DT 24-JAN-2024, entry version 102.
DE SubName: Full=HAT family dimerisation domain containing protein {ECO:0000313|EMBL:ABF94383.1};
GN OrderedLocusNames=LOC_Os03g08950 {ECO:0000313|EMBL:ABF94383.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:ABF94383.1};
RN [1] {ECO:0000313|EMBL:ABF94383.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG Rice Chromosome 3 Sequencing Consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S., Luo M.,
RA Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M., Pries G.,
RA Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2] {ECO:0000313|EMBL:ABF94383.1}
RP NUCLEOTIDE SEQUENCE.
RA Buell R., Wing R.A., McCombie W.A., Ouyang S.;
RL Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; DP000009; ABF94383.1; -; Genomic_DNA.
DR AlphaFoldDB; Q8H7N6; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR InterPro; IPR008906; HATC_C_dom.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR46481; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4; 1.
DR PANTHER; PTHR46481:SF1; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4; 1.
DR Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR Pfam; PF02892; zf-BED; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00027}.
FT DOMAIN 79..127
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 56..81
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..81
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 595 AA; 66349 MW; 77EBE8977AED6363 CRC64;
MDPNFPYQSP SFTLGDFDPN YMSGFDGTSG SAPTPPSVEE VPVHTAVVEE VPVQAETASE
GFSGTASGSV STHTGSKRSR TSGVWQSFDE IKETCPDGRE VSKARCRICR QILSARSSGG
TGHLKRHAES CAKKQGIQLR QQQLMVNPDG TVHSWEYDPM VARESLVRLI ARQDLPLNFG
ESPAFEHYIQ QSHNPRFKAV SRQTSTRDLE NVYHKEATAL KELFSTCTFS VSVTSDIWSS
RAREDYLSVV VHFVDDDWQL QKRVLGLRLI DVSHTGENIA ERIREVINEF NLADKIFAVT
LDNASANSRA IEILQPLFCV YAQSFLLHQR CACHIINLIV KTGMKRVGDH IDAVRQAIAW
LTASNPRIAA WKRFCNAAGV KAHPRCKLRG LSAILSLVGD TIGVDYSSFY TEVRRKLYEV
FGRYEVKFQE VRQQRPPPIP TTGKKKIQWG RIWGGSSSSS IQGGGSSSAT SGDASSHVVA
EELSGYLDSD AIHHEAQDFN VLGWWNDHKI TYPVLSKLAR DVLTVPVSTV SSESAFSLCG
RIIEDRRTTL RSDHVEMLLS VKDWELARQH AQYTADNQEL AAQFEQLYLD PDQPQ
//