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Database: UniProt
Entry: Q8KGF9
LinkDB: Q8KGF9
Original site: Q8KGF9 
ID   Y009_CHLTE              Reviewed;         483 AA.
AC   Q8KGF9;
DT   19-JUL-2004, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2002, sequence version 1.
DT   16-APR-2014, entry version 65.
DE   RecName: Full=Uncharacterized RNA methyltransferase CT0009;
DE            EC=2.1.1.-;
GN   OrderedLocusNames=CT0009;
OS   Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS).
OC   Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae;
OC   Chlorobaculum.
OX   NCBI_TaxID=194439;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 49652 / DSM 12025 / TLS;
RX   PubMed=12093901; DOI=10.1073/pnas.132181499;
RA   Eisen J.A., Nelson K.E., Paulsen I.T., Heidelberg J.F., Wu M.,
RA   Dodson R.J., DeBoy R.T., Gwinn M.L., Nelson W.C., Haft D.H.,
RA   Hickey E.K., Peterson J.D., Durkin A.S., Kolonay J.F., Yang F.,
RA   Holt I.E., Umayam L.A., Mason T.M., Brenner M., Shea T.P.,
RA   Parksey D.S., Nierman W.C., Feldblyum T.V., Hansen C.L., Craven M.B.,
RA   Radune D., Vamathevan J.J., Khouri H.M., White O., Gruber T.M.,
RA   Ketchum K.A., Venter J.C., Tettelin H., Bryant D.A., Fraser C.M.;
RT   "The complete genome sequence of Chlorobium tepidum TLS, a
RT   photosynthetic, anaerobic, green-sulfur bacterium.";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:9509-9514(2002).
CC   -!- SIMILARITY: Belongs to the class I-like SAM-binding
CC       methyltransferase superfamily. RNA M5U methyltransferase family.
CC   -!- SIMILARITY: Contains 1 TRAM domain.
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DR   EMBL; AE006470; AAM71257.1; -; Genomic_DNA.
DR   RefSeq; NP_660915.1; NC_002932.3.
DR   ProteinModelPortal; Q8KGF9; -.
DR   STRING; 194439.CT0009; -.
DR   DNASU; 1006160; -.
DR   EnsemblBacteria; AAM71257; AAM71257; CT0009.
DR   GeneID; 1006160; -.
DR   KEGG; cte:CT0009; -.
DR   PATRIC; 21398119; VBIChlTep116050_0009.
DR   eggNOG; COG2265; -.
DR   HOGENOM; HOG000029870; -.
DR   KO; K03215; -.
DR   OMA; NQCPVQD; -.
DR   OrthoDB; EOG6V4GKM; -.
DR   ProtClustDB; CLSK637102; -.
DR   BioCyc; CTEP194439:GHN0-9-MONOMER; -.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   Gene3D; 2.40.50.140; -; 1.
DR   InterPro; IPR001566; 23S_rRNA_MeTrfase_RlmD.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR002792; TRAM_dom.
DR   InterPro; IPR010280; U5_MeTrfase_fam.
DR   Pfam; PF01938; TRAM; 1.
DR   Pfam; PF05958; tRNA_U5-meth_tr; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR00479; rumA; 1.
DR   PROSITE; PS51687; SAM_MT_RNA_M5U; 1.
DR   PROSITE; PS50926; TRAM; 1.
DR   PROSITE; PS01230; TRMA_1; 1.
DR   PROSITE; PS01231; TRMA_2; 1.
PE   3: Inferred from homology;
KW   4Fe-4S; Complete proteome; Iron; Iron-sulfur; Metal-binding;
KW   Methyltransferase; Reference proteome; S-adenosyl-L-methionine;
KW   Transferase.
FT   CHAIN         1    483       Uncharacterized RNA methyltransferase
FT                                CT0009.
FT                                /FTId=PRO_0000161966.
FT   DOMAIN       11     71       TRAM.
FT   ACT_SITE    439    439       Nucleophile (By similarity).
FT   METAL        84     84       Iron-sulfur (4Fe-4S) (By similarity).
FT   METAL        90     90       Iron-sulfur (4Fe-4S) (By similarity).
FT   METAL        93     93       Iron-sulfur (4Fe-4S) (By similarity).
FT   METAL       187    187       Iron-sulfur (4Fe-4S) (By similarity).
FT   BINDING     312    312       S-adenosyl-L-methionine (By similarity).
FT   BINDING     341    341       S-adenosyl-L-methionine; via carbonyl
FT                                oxygen (By similarity).
FT   BINDING     362    362       S-adenosyl-L-methionine (By similarity).
FT   BINDING     412    412       S-adenosyl-L-methionine (By similarity).
SQ   SEQUENCE   483 AA;  54475 MW;  ADA9D915A6EFEAD5 CRC64;
     MHTPLEQQEI RYRKGDIIEL TITDHAEKDK CFGKTTEGMG VMVSGILAPG DRVSAQIYKV
     KSRYLEARAI EVLEASPDRV EPVCPVFGSC GGCKWMHVSY EAQLRYKHKK VTDSLEHIGG
     FESPDVRPVL AAPDALHYRN KVEFSCSNMR YLLQSEIDSD QLAKPKTFAL GFHAPGNFEK
     VLDLDTCYLA KECMNRVLNV LRDFAIERGL EPYAAKAHEG YLRNLMLRYS ERHEQLMVNI
     VTSWYDKALM QALKERLEAA MPEQQMTLLN NVTTRKNTVA TGEQEYVISG DGYVTERLGD
     LDFRISANSF FQTNTRQAET LYDQIIAVGG ITPEDTVYDL YCGTGTITLY LARHCKQAIG
     IEVVESAVKD AEMNAELNGL SNTVFFQADL KNFHAMQEAL EPYAKPRIIV TDPPRAGMHP
     KALDTMLKLQ PERIVYVSCN PDNLARDGKE IAARGYRMTS AQPVDMFPQT NHIETVACFE
     RAE
//
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