ID Q8VZ06_ARATH Unreviewed; 811 AA.
AC Q8VZ06;
DT 01-MAR-2002, integrated into UniProtKB/TrEMBL.
DT 01-MAR-2002, sequence version 1.
DT 27-MAR-2024, entry version 165.
DE SubName: Full=Putative SecA-type chloroplast protein transport factor {ECO:0000313|EMBL:AAL38845.1};
DE SubName: Full=Putative SecA-type chloroplast transport factor protein {ECO:0000313|EMBL:AAM20152.1};
DE SubName: Full=Zinc ion binding protein {ECO:0000313|EMBL:AEE30135.1};
GN OrderedLocusNames=At1g21650 {ECO:0000313|EMBL:AAL38845.1}, At1g21651
GN {ECO:0000313|EMBL:AEE30135.1}, At1g21655
GN {ECO:0000313|EMBL:BAF01579.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAL38845.1};
RN [1] {ECO:0000313|EMBL:AEE30135.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2] {ECO:0000313|EMBL:AAL38845.1}
RP NUCLEOTIDE SEQUENCE.
RA Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K.,
RA Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L.,
RA Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T.,
RA Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M.,
RA Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P.,
RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.;
RT "Arabidopsis Full Length cDNA Clones.";
RL Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AAM20152.1}
RP NUCLEOTIDE SEQUENCE.
RA Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M.,
RA Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M.,
RA Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P., Chen H., Cheuk R.,
RA Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G.,
RA Kawai J., Kim C., Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M.,
RA Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P.,
RA Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.;
RT "Arabidopsis Open Reading Frame (ORF) Clones.";
RL Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:BAF01579.1}
RP NUCLEOTIDE SEQUENCE.
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA Hayashizaki Y., Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AEE30135.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|EMBL:AEE30135.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [7] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY065404; AAL38845.1; -; mRNA.
DR EMBL; AY096502; AAM20152.1; -; mRNA.
DR EMBL; CP002684; AEE30135.1; -; Genomic_DNA.
DR EMBL; AK229742; BAF01579.1; -; mRNA.
DR RefSeq; NP_001117325.1; NM_001123853.1.
DR AlphaFoldDB; Q8VZ06; -.
DR SMR; Q8VZ06; -.
DR PaxDb; 3702-AT1G21651-1; -.
DR EnsemblPlants; AT1G21651.1; AT1G21651.1; AT1G21651.
DR GeneID; 6241299; -.
DR Gramene; AT1G21651.1; AT1G21651.1; AT1G21651.
DR KEGG; ath:AT1G21651; -.
DR TAIR; AT1G21651; -.
DR HOGENOM; CLU_021948_0_0_1; -.
DR OMA; WKCINGS; -.
DR OrthoDB; 33963at2759; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q8VZ06; baseline and differential.
DR CDD; cd16587; RING-HC_TRIM32_C-VII; 1.
DR Gene3D; 1.10.510.10; Transferase(Phosphotransferase) domain 1; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR011009; Kinase-like_dom_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR InterPro; IPR027370; Znf-RING_euk.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR44489; -; 1.
DR PANTHER; PTHR44489:SF11; F-BOX_WD REPEAT-CONTAINING PROTEIN A; 1.
DR Pfam; PF00400; WD40; 3.
DR Pfam; PF13445; zf-RING_UBOX; 1.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00184; RING; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF56112; Protein kinase-like (PK-like); 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 1: Evidence at protein level;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q8VZ06,
KW ECO:0007829|ProteomicsDB:Q8VZ06};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}; Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT DOMAIN 6..51
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REPEAT 520..559
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 651..690
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 811 AA; 90627 MW; B1A7E8D2155CEE21 CRC64;
MEEPECPVCL QSYDGESTVP RVLACGHTAC EECLTNLPKK FPDTIRCPAC TVLVKFPPQG
PSALPKNIDL LRLFPSISKL KLEPGRNFEK VVEFVTRSWS DDFYATWKDR ILVHDAVSVE
IRESESSDFD SSSRLCGSLR DDSKVSLLRV ASFEHGDCDS VLKYSYVQRM MSCLWGMREE
ERDELDAIIS VKQRGVSKVF GLWGDLKNGV LYLVGEKLIG FSLEEFDSLE DETLRLGIIG
MQICEALLNL HKEGLITGCL SVSCVKFDEY ENAYVDLIEL IETGRNVYRI IAEETSSLRK
PVGASEMGLI FVGLQQKGIF ISSEVLFEFL KEQNMLIKNT SSKSFVSHNS DVWPVCFLLL
KLRLGKRCTE EFIESVNCVD GKGCEEGIED ILVLYTGITE KLSLESELQG KFKSMVEILR
QCCCLDPQAR PVLTDLWKCI RELVMKPRFN SMSRLHKTIY GKRKQFCLAQ SELCRLVEVE
SKEVDKELPG MKIGDEAEEG KVDIDFPGRV SEGKVRSKDM RGHQDSVTGL AVGGGFLFSS
SYDRTILIWS LKDFSHVHTF KGHQDKVMAL IHIEGTEPVC VSGDGGGGIF VWSTTFPLEE
QPLRKWYEPK DWRYTGIHAL AYSEYGHVYT GSGDNTIKAW SLQDGSLLCT MSGHKSVVST
LVVVNGVLYS GSWDGTVRLW SLSDNSLLTV LGEETPGIVR SILSLAADDQ TLVAAYQNGD
IQIWRDDTLM KSMKIQNGAI LSIAVNGKWL FTGGWDKTIN VQELSGDEIS VNCAHVGSIP
GSSVITSLLY WEGKLFAGFA DKTIKVYYFG R
//
