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Database: UniProt
Entry: Q8VZK2_ARATH
LinkDB: Q8VZK2_ARATH
Original site: Q8VZK2_ARATH 
ID   Q8VZK2_ARATH            Unreviewed;       198 AA.
AC   Q8VZK2;
DT   01-MAR-2002, integrated into UniProtKB/TrEMBL.
DT   01-MAR-2002, sequence version 1.
DT   30-AUG-2017, entry version 105.
DE   RecName: Full=Translation machinery-associated protein 22 {ECO:0000256|RuleBase:RU361273};
GN   OrderedLocusNames=At5g11900 {ECO:0000313|Araport:AT5G11900,
GN   ECO:0000313|EMBL:AED91736.1};
GN   ORFNames=F14F18.70 {ECO:0000313|EMBL:AED91736.1}, F14F18_70
GN   {ECO:0000313|EMBL:AED91736.1};
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702 {ECO:0000313|EMBL:AAL36414.1};
RN   [1] {ECO:0000313|EMBL:AED91736.1, ECO:0000313|Proteomes:UP000006548}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX   PubMed=11130714; DOI=10.1038/35048507;
RG   Kazusa DNA Research Institute;
RG   Cold Spring Harbor and Washington University in St Louis Sequencing Consortium;
RG   European Union Arabidopsis Genome Sequencing Consortium;
RA   Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA   Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K.,
RA   Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S.,
RA   Nakazaki N., Naruo K., Okumura S., Shinpo S., Takeuchi C., Wada T.,
RA   Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M.,
RA   Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R.,
RA   Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J.,
RA   Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M.,
RA   Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M.,
RA   Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P.,
RA   Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C.,
RA   Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N.,
RA   Parnell L., Shah R., Rodriguez M., See L.H., Vil D., Baker J.,
RA   Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.,
RA   Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA   Volckaert G., Wambutt R., Dusterhoft A., Stiekema W., Pohl T.,
RA   Entian K.D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.A.,
RA   McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA   Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA   Mooijman P., Lankhorst R.K., Weitzenegger T., Bothe G., Rose M.,
RA   Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA   Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA   Mayer K., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.W.,
RA   Bevan M., Fransz P.;
RT   "Sequence and analysis of chromosome 5 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 408:823-826(2000).
RN   [2] {ECO:0000313|EMBL:AAL36414.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K.,
RA   Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L.,
RA   Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T.,
RA   Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J.,
RA   Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M.,
RA   Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R.,
RA   Theologis A.;
RT   "Arabidopsis Full Length cDNA Clones.";
RL   Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:AAP40412.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Yamada K., Dale J.M., Hsuan V.W., Onodera C.S., Quach H.L.,
RA   Toriumi M., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H.,
RA   Cheuk R., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Kawai J.,
RA   Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M.,
RA   Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K.,
RA   Davis R.W., Ecker J.R., Theologis A.;
RT   "Arabidopsis Open Reading Frame (ORF) Clones.";
RL   Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:BAD43209.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:BAD95123.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AED91736.1}
RP   NUCLEOTIDE SEQUENCE.
RG   TAIR;
RA   Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL   Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:AED91736.1, ECO:0000313|Proteomes:UP000006548}
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RG   The Arabidopsis Information Portal (Araport);
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBUNIT: Interacts with the 40S ribosomal subunit.
CC       {ECO:0000256|RuleBase:RU361273}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU361273}.
CC   -!- DOMAIN: The SUI1 domain may be involved in RNA binding.
CC       {ECO:0000256|RuleBase:RU361273}.
CC   -!- SIMILARITY: Belongs to the DENR family.
CC       {ECO:0000256|RuleBase:RU361273}.
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DR   EMBL; AY064058; AAL36414.1; -; mRNA.
DR   EMBL; BT008585; AAP40412.1; -; mRNA.
DR   EMBL; CP002688; AED91736.1; -; Genomic_DNA.
DR   EMBL; AK175446; BAD43209.1; -; mRNA.
DR   EMBL; AK175688; BAD43451.1; -; mRNA.
DR   EMBL; AK176536; BAD44299.1; -; mRNA.
DR   EMBL; AK221140; BAD95123.1; -; mRNA.
DR   RefSeq; NP_196751.2; NM_121228.5.
DR   UniGene; At.27058; -.
DR   STRING; 3702.AT5G11900.1; -.
DR   DNASU; 831063; -.
DR   EnsemblPlants; AT5G11900.1; AT5G11900.1; AT5G11900.
DR   GeneID; 831063; -.
DR   Gramene; AT5G11900.1; AT5G11900.1; AT5G11900.
DR   KEGG; ath:AT5G11900; -.
DR   Araport; AT5G11900; -.
DR   TAIR; locus:2143079; AT5G11900.
DR   eggNOG; KOG3239; Eukaryota.
DR   eggNOG; COG0023; LUCA.
DR   HOGENOM; HOG000237611; -.
DR   OMA; YCEYGGT; -.
DR   OrthoDB; EOG09360Q5D; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0070992; C:translation initiation complex; IBA:GO_Central.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   GO; GO:0043022; F:ribosome binding; IBA:GO_Central.
DR   GO; GO:0003743; F:translation initiation factor activity; IBA:GO_Central.
DR   GO; GO:0001731; P:formation of translation preinitiation complex; IBA:GO_Central.
DR   GO; GO:0002192; P:IRES-dependent translational initiation of linear mRNA; IBA:GO_Central.
DR   GO; GO:0002188; P:translation reinitiation; IBA:GO_Central.
DR   Gene3D; 3.30.780.10; -; 1.
DR   InterPro; IPR005873; Drp1.
DR   InterPro; IPR001950; SUI1.
DR   InterPro; IPR005872; SUI1_arc_bac.
DR   PANTHER; PTHR12789; PTHR12789; 1.
DR   Pfam; PF01253; SUI1; 1.
DR   SUPFAM; SSF55159; SSF55159; 2.
DR   TIGRFAMs; TIGR01159; DRP1; 1.
DR   PROSITE; PS50296; SUI1; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006548};
KW   Cytoplasm {ECO:0000256|RuleBase:RU361273};
KW   Initiation factor {ECO:0000313|EMBL:AED91736.1};
KW   Protein biosynthesis {ECO:0000313|EMBL:AED91736.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006548};
KW   Ribonucleoprotein {ECO:0000256|RuleBase:RU361273};
KW   Ribosomal protein {ECO:0000256|RuleBase:RU361273}.
FT   DOMAIN      107    178       SUI1. {ECO:0000259|PROSITE:PS50296}.
SQ   SEQUENCE   198 AA;  21591 MW;  E2B0B162390DD6A9 CRC64;
     MAEKLEPVKV LYCGVCSLPA EYCEFGPDFA RCKPWLVENA PDLYPDLLKE ANEKAADNVS
     DKLQSVGISS GGADGAPSSA QTGGTSKKEE VKRLPGGKVK KKDRQEVIIE KVVRNKRKCI
     TIVKGLELFG IKLSDASKKL GKKFATGASV VKGPTEKEQI DVQGDIIYDI VEFITDTWPD
     VPERSIFFIE DGKKVQAG
//
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