ID Q9AR00_SOLLC Unreviewed; 602 AA.
AC Q9AR00;
DT 01-JUN-2001, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2001, sequence version 1.
DT 27-MAR-2024, entry version 89.
DE SubName: Full=PSTVd RNA-biding protein, Virp1 {ECO:0000313|EMBL:CAC33451.1};
DE SubName: Full=PSTVd RNA-binding protein Virp1a {ECO:0000313|EMBL:AAG13810.1};
DE SubName: Full=PSTVd RNA-binding protein Virp1b {ECO:0000313|EMBL:AAG13811.1};
DE SubName: Full=PSTVd RNA-binding protein Virp1c {ECO:0000313|EMBL:AAG13812.1};
DE SubName: Full=PSTVd RNA-binding protein Virp1d {ECO:0000313|EMBL:AAG13813.1};
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081 {ECO:0000313|EMBL:CAC33451.1};
RN [1] {ECO:0000313|EMBL:CAC33451.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=12915580; DOI=10.1128/JVI.77.17.9685-9694.2003;
RA Martinez de Alba A.E., Sagesser R., Tabler M., Tsagris M.;
RT "A bromodomain-containing protein from tomato specifically binds potato
RT spindle tuber viroid RNA in vitro and in vivo.";
RL J. Virol. 77:9685-9694(2003).
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DR EMBL; AF190891; AAG13810.1; -; mRNA.
DR EMBL; AF190892; AAG13811.1; -; mRNA.
DR EMBL; AF190893; AAG13812.1; -; mRNA.
DR EMBL; AF190894; AAG13813.1; -; mRNA.
DR EMBL; AJ249592; CAC33448.1; -; mRNA.
DR EMBL; AJ249593; CAC33449.1; -; mRNA.
DR EMBL; AJ249594; CAC33450.1; -; mRNA.
DR EMBL; AJ249595; CAC33451.1; -; mRNA.
DR RefSeq; NP_001234374.2; NM_001247445.2.
DR AlphaFoldDB; Q9AR00; -.
DR SMR; Q9AR00; -.
DR GeneID; 543627; -.
DR KEGG; sly:543627; -.
DR OrthoDB; 152619at2759; -.
DR ExpressionAtlas; Q9AR00; baseline and differential.
DR Gene3D; 1.20.1270.220; -; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR027353; NET_dom.
DR InterPro; IPR038336; NET_sf.
DR PANTHER; PTHR45926:SF6; HOMEOTIC PROTEIN FEMALE STERILE-RELATED; 1.
DR PANTHER; PTHR45926; OSJNBA0053K19.4 PROTEIN; 1.
DR Pfam; PF17035; BET; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS51525; NET; 1.
PE 2: Evidence at transcript level;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035}.
FT DOMAIN 204..276
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 399..480
FT /note="NET"
FT /evidence="ECO:0000259|PROSITE:PS51525"
FT REGION 1..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 128..180
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 300..409
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 485..602
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 29..43
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..157
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 339..353
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 354..370
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 485..512
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 513..529
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 538..557
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 561..595
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 602 AA; 65585 MW; 83DA80204A057867 CRC64;
MASAVLASRN ESSWAQSGGA GGGFMGKTPY SHTQLNPNHN PNPKKKQKQF HHTSNGRHMD
DSPAVTQTAS DDAYSFNQRP IESTTNVDGL NFGGYLTFNV VSYNKAEVNE LRSRLMAEVE
QIRNLKDRIE SGQLSTTNPR SQGKSKKQSG NKRPTPSGSS KDLKKLPNGV ENRNFGNPGG
VDGVKAIGTE SMMKECRQIL AKLMKHKNGW IFNIPVDAEA LGLHDYHQII KRPMDLGTVK
SNLAKNFYPS PFEFAADVRL TFNNALLYNP KTDQVNAFAE QLLGRFEDMF RPLQDKMNKL
EGGRRDYHPV DELQGSSWNH IPTPERVKKP KPTPVPNISK KQERMQNHSS ASTPSLPVPP
PNPPARQQSP LSTPSPVRAP AAKPQSAAKV PTMGKQPKPR AKDPNKREMN MEEKHKLGVG
LQSLPQEKMP QLVQIIRKRN EHLAQDGDEI ELDIEALDTE TLWELDRFVT NWKKMVSKTK
RQALMNNLGP PSASAAASAA TTSVAEADGP TTSEKNDSFK KAKKGDVGEE DVEIEDDEPA
THFPPVEIEK DEGGGRDQEN GGGGGSSSSS SSSSSSSGSS SSSDSDSGSS SGSDSDADDA
HS
//
