ID Q9KIX2_BRASO Unreviewed; 506 AA.
AC Q9KIX2;
DT 01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2000, sequence version 1.
DT 24-JAN-2024, entry version 106.
DE RecName: Full=Phytoene dehydrogenase {ECO:0000256|ARBA:ARBA00031986};
GN Name=crtI {ECO:0000313|EMBL:AAF78201.1};
GN OrderedLocusNames=BRADO6507 {ECO:0000313|EMBL:CAL80119.1};
OS Bradyrhizobium sp. (strain ORS 278).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=114615 {ECO:0000313|EMBL:AAF78201.1};
RN [1] {ECO:0000313|EMBL:AAF78201.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ORS278 {ECO:0000313|EMBL:AAF78201.1};
RX PubMed=10851005; DOI=10.1128/JB.182.13.3850-3853.2000;
RA Hannibal L., Lorquin J., D'Ortoli N.A., Garcia N., Chaintreuil C.,
RA Masson-Boivin C., Dreyfus B., Giraud E.;
RT "Isolation and characterization of canthaxanthin biosynthesis genes from
RT the photosynthetic bacterium Bradyrhizobium sp. strain ORS278.";
RL J. Bacteriol. 182:3850-3853(2000).
RN [2] {ECO:0000313|EMBL:CAL80119.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=ORS278 {ECO:0000313|EMBL:CAL80119.1};
RG 1:Genoscope, UMR 8030, France 2:LSTM, France 3:Dep SWC;
RG and BioTechnology Institute, USA 4:CEA/Cadarache,DEVM,UMR 6191, France 5:NCSB , USA 6:DOE , USA 7:DOE , USA 8:Universite Lyon1, France;
RG UMR5557, France;
RG IFR 41, France.;
RA Genoscope;
RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAL80119.1, ECO:0000313|Proteomes:UP000001994}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ORS 278 {ECO:0000313|Proteomes:UP000001994}, and ORS278
RC {ECO:0000313|EMBL:CAL80119.1};
RX PubMed=17540897; DOI=10.1126/science.1139548;
RA Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C.,
RA Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L.,
RA Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z.,
RA Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., Saunders E.,
RA Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G.,
RA Emerich D., Vermeglio A., Medigue C., Sadowsky M.;
RT "Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia.";
RL Science 316:1307-1312(2007).
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000256|ARBA:ARBA00001974};
CC -!- PATHWAY: Carotenoid biosynthesis. {ECO:0000256|ARBA:ARBA00004829,
CC ECO:0000256|RuleBase:RU362075}.
CC -!- SIMILARITY: Belongs to the carotenoid/retinoid oxidoreductase family.
CC {ECO:0000256|ARBA:ARBA00006046, ECO:0000256|RuleBase:RU362075}.
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DR EMBL; AF218415; AAF78201.1; -; Genomic_DNA.
DR EMBL; CU234118; CAL80119.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9KIX2; -.
DR STRING; 114615.BRADO6507; -.
DR KEGG; bra:BRADO6507; -.
DR eggNOG; COG1233; Bacteria.
DR HOGENOM; CLU_019722_2_1_5; -.
DR OMA; INYPKGG; -.
DR Proteomes; UP000001994; Chromosome.
DR GO; GO:0016627; F:oxidoreductase activity, acting on the CH-CH group of donors; IEA:UniProt.
DR GO; GO:0016117; P:carotenoid biosynthetic process; IEA:UniProtKB-KW.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 3.
DR InterPro; IPR002937; Amino_oxidase.
DR InterPro; IPR014105; Carotenoid/retinoid_OxRdtase.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR008150; Phytoene_DH_bac_CS.
DR NCBIfam; TIGR02734; crtI_fam; 1.
DR PANTHER; PTHR43734:SF3; B-CAROTENE KETOLASE; 1.
DR PANTHER; PTHR43734; PHYTOENE DESATURASE; 1.
DR Pfam; PF01593; Amino_oxidase; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR PROSITE; PS00982; PHYTOENE_DH; 1.
PE 3: Inferred from homology;
KW Carotenoid biosynthesis {ECO:0000256|ARBA:ARBA00022746,
KW ECO:0000256|RuleBase:RU362075};
KW Oxidoreductase {ECO:0000256|RuleBase:RU362075,
KW ECO:0000313|EMBL:CAL80119.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001994}.
FT DOMAIN 19..496
FT /note="Amine oxidase"
FT /evidence="ECO:0000259|Pfam:PF01593"
SQ SEQUENCE 506 AA; 56224 MW; 435F949E6FDEEED3 CRC64;
MSQEMQNAKT AVVIGSGFGG LSLAIRLQSA GIATTLVEKR DKFGGRAYVY EQDGFTFDAG
PTVITDPTCL QELFALSGRK LENYVELMPV SPFYQLRWED GATFDYVNDQ AELERQIAAF
CPADVDGYRR FRSYSERLLE EGYVKLGHVP FPDFRSMVRV APQLVALQSY RSVYSKVSQY
VSDEHLRQAF SFHSLLVGGN PFATSSIYAL IHALERRWGV WFPRGGTGAL INKGLVQLFK
DLGGEVTLST SVSRIETANG RVSAVVAEDG RRFAADIVAS NADVVHTYRD LLKDEPLARP
TAQSLMRKRF SMSLFVIYFG LRREHPELKH HIILFGRRYR ELINEIFKGP ALPEDFSLYL
HAPSVTDPSL APQGCSTYYV LSPVPHLAAA PIDWSVEGPR YRDRILDYLE ARILPGLKSD
LATCRIFTPQ DFNTELNAHL GSAFSLEPIL TQSAYFRAHN ADDKIKGLYL VGAGTHPGAG
IPGVVGSAKA TARVILEDQR ELAEAQ
//