ID Q9LPJ0_ARATH Unreviewed; 277 AA.
AC Q9LPJ0;
DT 01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2000, sequence version 1.
DT 27-MAR-2024, entry version 109.
DE SubName: Full=F6N18.12 {ECO:0000313|EMBL:AAF25971.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAF25971.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2] {ECO:0000313|EMBL:AAF25971.1}
RP NUCLEOTIDE SEQUENCE.
RA Chao Q., Brooks S., Buehler E., Johnson-Hopson C., Khan S., Kim C.,
RA Shinn P., Altafi H., Bei Q., Chin C., Chiou J., Choi E., Conn L.,
RA Conway A., Gonzales A., Hansen N., Howng B., Koo T., Lam B., Lee J.,
RA Lenz C., Li J., Liu A., Liu K., Liu S., Mukharsky N., Nguyen M., Palm C.,
RA Pham P., Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M.,
RA Vaysberg M., Yu G., Federspiel N.A., Theologis A., Ecker J.R.;
RT "Genomic sequence for Arabidopsis thaliana BAC F6N18 from chromosome I.";
RL Submitted (JAN-2000) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AAF25971.1}
RP NUCLEOTIDE SEQUENCE.
RA Cheuk R., Shinn P., Brooks S., Buehler E., Chao Q., Johnson-Hopson C.,
RA Khan S., Kim C., Altafi H., Bei B., Chin C., Chiou J., Choi E., Conn L.,
RA Conway A., Gonzalez A., Hansen N., Howing B., Koo T., Lam B., Lee J.,
RA Lenz C., Li J., Liu A., Liu J., Liu S., Mukharsky N., Nguyen M., Palm C.,
RA Pham P., Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M.,
RA Vaysberg M., Yu G., Davis R., Federspiel N., Theologis A., Ecker J.;
RL Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AAF25971.1}
RP NUCLEOTIDE SEQUENCE.
RA Shinn P., Brooks S., Buehler E., Chao Q., Johnson-Hopson C., Khan S.,
RA Kim C., Altafi H., Bei B., Chin C., Chiou J., Choi E., Conn L., Conway A.,
RA Gonzalez A., Hansen N., Howing B., Koo T., Lam B., Lee J., Lenz C., Li J.,
RA Liu A., Liu J., Liu S., Mukharsky N., Nguyen M., Palm C., Pham P.,
RA Sakano H., Schwartz J., Southwick A., Thaveri A., Toriumi M., Vaysberg M.,
RA Yu G., Davis R., Federspiel N., Theologis A., Ecker J.;
RL Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AC017118; AAF25971.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9LPJ0; -.
DR ExpressionAtlas; Q9LPJ0; baseline and differential.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR42647:SF5; EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 4A; 1.
DR PANTHER; PTHR42647; SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR PIRSF; PIRSF036836; RNase_bind_SBP1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 230..264
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT COILED 124..186
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 277 AA; 31353 MW; 2916B7EF1EFB57FB CRC64;
MSLIIGSNQR KRRRETNNHQ LLPMQSHQFP QVIDLSLLHN YNHPPSNMVH TGLRLFSGED
QAQKISHLSE DVFAAHINRQ SEELDEFLHA QVLISYETIW AEELRRTLAE KRKMHYKALL
GAVEESLVRK LREKEVEIER ATRRHNELVA RDSQLRAEVQ VWQERAKAHE DAAASLQSQL
QQAVNQCAGG CVSAQDSRAA EEGLLCTTIS GVDDAESVYV DPERVKRPNC KACREREATV
VVLPCRHLSI CPGCDRTALA CPLCLTLRNS SVEAIFC
//
