ID Q9M6G4_NELNU Unreviewed; 389 AA.
AC Q9M6G4;
DT 01-OCT-2000, integrated into UniProtKB/TrEMBL.
DT 01-OCT-2000, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:AAF26342.1};
DE Flags: Fragment;
GN Name=PHYA {ECO:0000313|EMBL:AAF26342.1};
OS Nelumbo nucifera (Sacred lotus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo.
OX NCBI_TaxID=4432 {ECO:0000313|EMBL:AAF26342.1};
RN [1] {ECO:0000313|EMBL:AAF26342.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=10542147; DOI=10.1126/science.286.5441.947;
RA Mathews S., Donoghue M.J.;
RT "The root of angiosperm phylogeny inferred from duplicate phytochrome
RT genes.";
RL Science 286:947-950(1999).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; AF190096; AAF26342.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9M6G4; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:UniProt.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 32..205
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AAF26342.1"
FT NON_TER 389
FT /evidence="ECO:0000313|EMBL:AAF26342.1"
SQ SEQUENCE 389 AA; 43835 MW; 8EF1956842345C94 CRC64;
PYEVPMTAAG ALQSYKLAAK AIARLQALPS GCMDRLCDTV VQEVFELTGY DRVMAYKFHE
DDHGEVVSEI TKPGLEPYLG LHYPATDIPQ AARFLFMKNK VRMICDCRAK HVKVLQDEKL
PFDLTLCGST LRAPHSCHLQ YMENMDSIAS LVMAVVVNEG DEEGEASGSS QQQKRKKLWG
LVVCHNTTPR FVPFPLRYAC EFLIQVFAIH VNKEIELENQ ILEKNILRTQ TLLCDMLMRD
ALLGIISQSP NVMDLVKCDG AALLYKNKIW QLGTTPTEFQ IHDIASWLSE YHMDSTGLST
DSFYDAGFPG ALSLGDAVCG MAAVRITSKD MLFWFRSHTA AEVRWGGAKH DPDEKDDGRR
MHPRSSFKAF LEVVKTRSLP WKDYEMDAI
//
