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Database: UniProt
Entry: Q9W0F4_DROME
LinkDB: Q9W0F4_DROME
Original site: Q9W0F4_DROME 
ID   Q9W0F4_DROME            Unreviewed;       973 AA.
AC   Q9W0F4;
DT   01-MAY-2000, integrated into UniProtKB/TrEMBL.
DT   30-NOV-2010, sequence version 3.
DT   22-NOV-2017, entry version 110.
DE   SubName: Full=Stromalin-2 {ECO:0000313|EMBL:AAF47494.3};
GN   Name=SA-2 {ECO:0000313|EMBL:AAF47494.3,
GN   ECO:0000313|FlyBase:FBgn0043865};
GN   Synonyms=anon-WO0109301.35 {ECO:0000313|EMBL:AAF47494.3}, CG1
GN   {ECO:0000313|EMBL:AAF47494.3}, Dmel\CG13916
GN   {ECO:0000313|EMBL:AAF47494.3}, pf-1 {ECO:0000313|EMBL:AAF47494.3}, SNM
GN   {ECO:0000313|EMBL:AAF47494.3}, snm {ECO:0000313|EMBL:AAF47494.3};
GN   ORFNames=CG13916 {ECO:0000313|EMBL:AAF47494.3,
GN   ECO:0000313|FlyBase:FBgn0043865}, Dmel_CG13916
GN   {ECO:0000313|EMBL:AAF47494.3};
OS   Drosophila melanogaster (Fruit fly).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
OC   Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
OC   Ephydroidea; Drosophilidae; Drosophila; Sophophora.
OX   NCBI_TaxID=7227 {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803};
RN   [1] {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=10731132; DOI=10.1126/science.287.5461.2185;
RA   Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
RA   Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
RA   George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
RA   Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
RA   Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
RA   Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
RA   Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
RA   Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
RA   Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
RA   Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
RA   Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
RA   Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
RA   de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
RA   Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
RA   Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
RA   Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
RA   Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
RA   Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
RA   Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
RA   Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
RA   Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
RA   Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
RA   Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
RA   Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
RA   Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
RA   Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
RA   Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
RA   Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
RA   Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
RA   Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
RA   Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
RA   Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
RA   Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
RA   Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
RA   Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
RA   Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
RT   "The genome sequence of Drosophila melanogaster.";
RL   Science 287:2185-2195(2000).
RN   [2] {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=12537568;
RA   Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
RA   Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
RA   George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
RA   Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
RA   Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
RA   Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
RT   "Finishing a whole-genome shotgun: release 3 of the Drosophila
RT   melanogaster euchromatic genome sequence.";
RL   Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
RN   [3] {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803}
RP   GENOME REANNOTATION.
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
RA   Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
RA   Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
RA   Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
RA   Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
RA   Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
RA   Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
RA   Lewis S.E.;
RT   "Annotation of the Drosophila melanogaster euchromatic genome: a
RT   systematic review.";
RL   Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
RN   [4] {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=12537573;
RA   Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
RA   Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
RA   Ashburner M., Celniker S.E.;
RT   "The transposable elements of the Drosophila melanogaster euchromatin:
RT   a genomics perspective.";
RL   Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
RN   [5] {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=12537574;
RA   Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
RA   Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
RA   Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
RA   Karpen G.H.;
RT   "Heterochromatic sequences in a Drosophila whole-genome shotgun
RT   assembly.";
RL   Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
RN   [6] {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
RA   Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
RA   Ashburner M., Anxolabehere D.;
RT   "Combined evidence annotation of transposable elements in genome
RT   sequences.";
RL   PLoS Comput. Biol. 1:166-175(2005).
RN   [7] {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=17569856; DOI=10.1126/science.1139815;
RA   Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
RT   "The Release 5.1 annotation of Drosophila melanogaster
RT   heterochromatin.";
RL   Science 316:1586-1591(2007).
RN   [8] {ECO:0000313|EMBL:AAF47494.3, ECO:0000313|Proteomes:UP000000803}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
RX   PubMed=17569867; DOI=10.1126/science.1139816;
RA   Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
RA   Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
RA   Dimitri P., Karpen G.H., Celniker S.E.;
RT   "Sequence finishing and mapping of Drosophila melanogaster
RT   heterochromatin.";
RL   Science 316:1625-1628(2007).
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DR   EMBL; AE014296; AAF47494.3; -; Genomic_DNA.
DR   RefSeq; NP_612109.3; NM_138265.3.
DR   UniGene; Dm.5578; -.
DR   ProteinModelPortal; Q9W0F4; -.
DR   IntAct; Q9W0F4; 1.
DR   STRING; 7227.FBpp0291002; -.
DR   PaxDb; Q9W0F4; -.
DR   PRIDE; Q9W0F4; -.
DR   EnsemblMetazoa; FBtr0301788; FBpp0291002; FBgn0043865.
DR   GeneID; 38167; -.
DR   KEGG; dme:Dmel_CG13916; -.
DR   UCSC; CG13916-RA; d. melanogaster.
DR   CTD; 38167; -.
DR   FlyBase; FBgn0043865; SA-2.
DR   eggNOG; KOG2011; Eukaryota.
DR   eggNOG; COG5537; LUCA.
DR   GeneTree; ENSGT00390000014094; -.
DR   InParanoid; Q9W0F4; -.
DR   KO; K06671; -.
DR   OMA; FRHTGTM; -.
DR   OrthoDB; EOG091G045A; -.
DR   Reactome; R-DME-2468052; Establishment of Sister Chromatid Cohesion.
DR   Reactome; R-DME-2470946; Cohesin Loading onto Chromatin.
DR   Reactome; R-DME-2500257; Resolution of Sister Chromatid Cohesion.
DR   GenomeRNAi; 38167; -.
DR   Proteomes; UP000000803; Chromosome 3L.
DR   Bgee; FBgn0043865; -.
DR   ExpressionAtlas; Q9W0F4; differential.
DR   Genevisible; Q9W0F4; DM.
DR   Gene3D; 1.25.10.10; -; 1.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR020839; SCD.
DR   InterPro; IPR013721; STAG.
DR   Pfam; PF08514; STAG; 1.
DR   SUPFAM; SSF48371; SSF48371; 2.
DR   PROSITE; PS51425; SCD; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000803};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000803}.
FT   DOMAIN      227    312       SCD. {ECO:0000259|PROSITE:PS51425}.
SQ   SEQUENCE   973 AA;  110924 MW;  46D175EF522199E5 CRC64;
     MSDISFDDAV LNDSQASNQM DFEIREECSI APNDEPVCVD GTVGDATNKS LLQMILSRKR
     LSPTNKRNSH IESVAKYWGE FYLDSPTAAL VALLQFVVEV SGSHYQIPDD TSMPFSYSDI
     LSNSSSHFSN THIYPLIRKP ADVFVNQVGS FLNALLLVAN KFRSDSYQLF LVQLTNFVMA
     CSESNIRTFR HTATMIGLKI MTILSDLKSL DDEIAMTVWM QMFNSMFVAR SRDIVTDIRL
     LCISELGQWF ARYPHCHLQP TSLRIFYEAL NDGSGDVIQC SLDNISVLCR KDVLFSEIVA
     LTSEFREILV ELCLGKEDAI AEKSVQFLTH FHVLSAEILT DDVCRVLEQL IMAANRGLAQ
     AAADLFILRR NGLDGETFCQ RVKHLLQLFI ECGHEQADYL VDSLIDNCEL VLDWKSMIAV
     LLENPKSREL SDIHCSSLIA ILLAGVKQAT AGEIPPGRYT KDLKREPRQG AQERATKCLA
     PVLPELLRTY ANRLQDIERL LELPKYFCFD YYHEQNRMGQ LNELVEHFEL IIFDQTSSTT
     VLQITVKTLE FLNRMIPIPL TKQLLNSAVT NYKMAWHRTQ DTSPSRSTHN ESNRLLATLR
     LLTVLSGHFN LSKWDLTEPL LFSLKMLLRQ RRLPNGDDLP PEAFSLYLKA CFCCLCWDME
     NLEGTALNNV DMDEYCDVLH HNLEDYLYVT FSLVGKSNTE PLAYPCFSYT CDLFVLHGNL
     CGSSNPSIRS VAHVPSGNEL DILEGFLMEH FLELSPSDLM LETNSDQLQR IRSILTSYLK
     VVCLGVVPTM RASKFYEYYV KYHAPFGDVM RCSMELALQR NPIHFAMTML HTCLLLYAKV
     FPDDTRHAAG QRALRPAEFS ELMELANRLA KILISNPMEH RECVIALHRS GILFVFELAQ
     KQPTEATKKL PFLRVLKVFV PLLLVQDKTR ILNFFEPYEQ LIIPTCNRND IAHLKEYRNA
     LRPRKTKSYP QAT
//
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