ID R0ETE1_9BRAS Unreviewed; 1108 AA.
AC R0ETE1;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=tRNA ligase phosphodiesterase domain-containing protein {ECO:0000259|Pfam:PF08302};
GN ORFNames=CARUB_v10007914mg {ECO:0000313|EMBL:EOA12342.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA12342.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
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DR EMBL; KB870815; EOA12342.1; -; Genomic_DNA.
DR RefSeq; XP_006279444.1; XM_006279382.1.
DR AlphaFoldDB; R0ETE1; -.
DR STRING; 81985.R0ETE1; -.
DR GeneID; 17874564; -.
DR KEGG; crb:17874564; -.
DR eggNOG; ENOG502QSM5; Eukaryota.
DR OrthoDB; 341045at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003972; F:RNA ligase (ATP) activity; IEA:InterPro.
DR GO; GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IEA:InterPro.
DR InterPro; IPR015965; tRNA_lig_PDEase.
DR InterPro; IPR038837; tRNA_ligase_1.
DR PANTHER; PTHR35460; TRNA LIGASE 1; 1.
DR PANTHER; PTHR35460:SF1; TRNA LIGASE 1; 1.
DR Pfam; PF08302; tRNA_lig_CPD; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121}.
FT DOMAIN 933..1088
FT /note="tRNA ligase phosphodiesterase"
FT /evidence="ECO:0000259|Pfam:PF08302"
FT REGION 61..82
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1108 AA; 124002 MW; EACCC593E7980126 CRC64;
MDAPSESSDH SVSVVAEAVN NQFGALSLGE RNTKVPVLPS QSASNRSVQN LVWKPKSYGT
VSRSSSATEV GKTATVSETG SPGDSKVGLN LSNFCGGNFL ENFTVDKSTY CHAQIRATFY
PKFENEKTDQ EIRTRMIELV SKGLATLEVS QKHSGSLFMY AGHKGGAYAK NSFGNIYTAV
GVFVLSRMFR EAWGTKALEK EAEFNDFLEK NRMCISMELV TAVLGDHGQR PLDDYVVVTA
VTELGNGKPK FYSTSEIIEF CRKWRLPTNH VWLFSTRRSV TSFFAAFDVL CEEGIATSVC
KALDEVAEIS VPGSKDHVKV QGEILEGLVA RIVSSQSARD MENVLRDHPP PPCDGANLDL
GPSLREICAS HRSNEKQQMR AILSSIGPSF CPSDLDWFGD ESHLKNADKS VITKFLQSQP
VDYSTSKLQE MVCLMKEKRL PAAFKCYHNC HRANDISSDN LFYKLVVHVH NDSGFRRYQK
EMRHTPSLWP LYRGFFVDIN LFKSNKGKDL MALKSIDYAV KDASENDGQH GKDGLADDDA
NLMMKLKFLT YKLRTFLIRN GLSILFKDGP AAYKTYYLRQ MQIWGTSEGK QKELCKMLDE
WATYIRRKCG NDQPSSSTYL SEAEPFLEQY AKQSPRNQIL IGSAGNLVRT EDFLAIVEGD
LDKEGDILKK EGVTPATPEP AVKDAVHKDE GLIVFFPGIP GCAKSALCKE LLNSPGGFRD
DRPVHTLMGD LVKGKYWPKI ADERRKNPQS IMLADKNAPN EDVWRQIEDM CRRTRASAVP
IVTDSEGTDT NPYSLDALAV FIFRVLQRVN HPGKLDKASL NAGYVLLMFY HLYEGKNRKE
FESELIERFG SLVKMPLLKI DRTPIPENVK EVLEEGIDLF NLHSRRHGRL ESTKGTYAAE
WTKWEKQLRD TLLANSEYLN SIQVPFESAV HQVREELKRI AKGEYKPPSS EKTKHGSIVF
AAINLPATQV HSLLETLAAA YPTVKSFLEG KEKRIQEKLE RCHVTLAHKR SHGVAAVASY
GQHLNREVPI ELTQLIYNDK MAALTAHVGS VDGETIISKN EWPHVTLWTA EGVTAKEANT
LPQLYLEGKV SRLVIDPPVS ISGPLEFF
//
