ID R0H5H1_9BRAS Unreviewed; 820 AA.
AC R0H5H1;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CARUB_v10000236mg {ECO:0000313|EMBL:EOA19975.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA19975.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
RN [2] {ECO:0000313|EMBL:EOA19975.1}
RP NUCLEOTIDE SEQUENCE.
RA Schmutz J., Prochnik S., Nordborg M., Weigel D., Rokhsar D., Wright S.;
RT "Genome sequencing of Capsella rubella.";
RL Nat. Genet. 0:0-0(2013).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KB870810; EOA19975.1; -; Genomic_DNA.
DR EMBL; KB870810; EOA19976.1; -; Genomic_DNA.
DR RefSeq; XP_006287077.1; XM_006287015.1.
DR RefSeq; XP_006287078.1; XM_006287016.1.
DR AlphaFoldDB; R0H5H1; -.
DR STRING; 81985.R0H5H1; -.
DR GeneID; 17882012; -.
DR KEGG; crb:17882012; -.
DR eggNOG; KOG4197; Eukaryota.
DR OrthoDB; 1215801at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 14.
DR PANTHER; PTHR47942:SF63; ATPASE EXPRESSION PROTEIN 3; 1.
DR PANTHER; PTHR47942; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 3.
DR Pfam; PF13812; PPR_3; 3.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 16.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 208..242
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 243..278
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 279..313
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 314..348
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 349..383
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 384..418
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 419..453
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 454..488
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 489..523
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 524..558
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 594..628
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 629..663
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 664..698
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 699..733
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 734..768
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 769..803
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 15..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 17..36
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 55..73
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 820 AA; 92247 MW; F36AC155EB352CE7 CRC64;
MADKLALPLL LPCTPSSKPF SHDQNHHLSR TPFLTTSLSS PPPPPPVEPL LHDVFLHQNS
NSRQPISSQT HRSRNRTRIG KSRDSNLGKP WSYHGLSPQG QQVLRSLIEP AFDSGQLDAL
LSKLFEPYKD KPESTSSELL AFLKGLGFHK KFDLALRAFD WFMKQKDYQS MLDNSVIAIV
ISMLGKEGKV SSAANLFNGL QEDGFSLDVY SYTSLISAFA NSGRYREAVN VFKKMEEEGC
KPTLITYNVI LNVFGKMGSP WNKITSLVEK MKTDGIAPDA YTYNTLITCC KRGSLHQEAA
QVFEEMKAAG FSHDKVTYNA LLDVYGKSHR PKEAMKVLNE MELNGFSPSI VTYNSLISAY
ARDGMLDEAM ELKNQMSEKG TKPDVFTYTT LLSGFERAGK VESAMNIFEE MRNAGCKPNI
CTFNAFIKMY GNRGKFADMM KIFDEINMCG LSPDIVTWNT LLAVFGQNGM DSEVSGVFKE
MKRAGFVPER ETFNTLISAY SRCGSFEQAM TVYRRMLDAG VTPDLSTYNT VLAALARGGM
WEQSEKVLAE MEDGRCKPNE LTYCSLLHAY ANGKEIGLMH SLAEEVYSGV IEPRAVLLKT
LVLVCSKCDL LSEAERAFSE LKERGFSPDI TTLNSMVSIY GRRQMVAKAN EVLDYMKERG
FTPSMATYNS LMYMHSRSAD FGKSEEILRE ILAKGIKPDI ISYNTVIYAY CRNTRMRDAS
RIFSEMRDSG IVPDVITYNT FIGSYAADSM FEEALGVVRY MIKHSCRPNQ NTYNSIVDGY
CKLNRKDEAK LFVEDLRNLD PHAPKGEDLR LLERILKKWP
//