ID R0H9A5_9BRAS Unreviewed; 620 AA.
AC R0H9A5;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=Pescadillo homolog {ECO:0000256|HAMAP-Rule:MF_03028};
GN ORFNames=CARUB_v10000475mg {ECO:0000313|EMBL:EOA20178.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA20178.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
CC -!- FUNCTION: Required for maturation of ribosomal RNAs and formation of
CC the large ribosomal subunit. {ECO:0000256|HAMAP-Rule:MF_03028}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000256|HAMAP-
CC Rule:MF_03028}. Nucleus, nucleoplasm {ECO:0000256|HAMAP-Rule:MF_03028}.
CC -!- SIMILARITY: Belongs to the pescadillo family. {ECO:0000256|HAMAP-
CC Rule:MF_03028}.
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DR EMBL; KB870810; EOA20178.1; -; Genomic_DNA.
DR RefSeq; XP_006287280.1; XM_006287218.1.
DR AlphaFoldDB; R0H9A5; -.
DR STRING; 81985.R0H9A5; -.
DR GeneID; 17883696; -.
DR KEGG; crb:17883696; -.
DR eggNOG; KOG2481; Eukaryota.
DR OrthoDB; 169151at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IEA:UniProtKB-UniRule.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR CDD; cd17709; BRCT_pescadillo_like; 1.
DR Gene3D; 3.40.50.10190; BRCT domain; 1.
DR HAMAP; MF_03028; Pescadillo; 1.
DR InterPro; IPR001357; BRCT_dom.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR010613; PES.
DR PANTHER; PTHR12221; PESCADILLO - RELATED; 1.
DR PANTHER; PTHR12221:SF6; PESCADILLO HOMOLOG; 1.
DR Pfam; PF16589; BRCT_2; 1.
DR Pfam; PF06732; Pescadillo_N; 1.
DR SMART; SM00292; BRCT; 1.
DR SUPFAM; SSF52113; BRCT domain; 1.
DR PROSITE; PS50172; BRCT; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|HAMAP-Rule:MF_03028};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|HAMAP-Rule:MF_03028};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW Ribosome biogenesis {ECO:0000256|ARBA:ARBA00022517, ECO:0000256|HAMAP-
KW Rule:MF_03028};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552, ECO:0000256|HAMAP-
KW Rule:MF_03028}; Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..23
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 24..620
FT /note="Pescadillo homolog"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004351858"
FT DOMAIN 365..455
FT /note="BRCT"
FT /evidence="ECO:0000259|PROSITE:PS50172"
FT COILED 108..135
FT /evidence="ECO:0000256|HAMAP-Rule:MF_03028"
SQ SEQUENCE 620 AA; 71146 MW; E280267CA0F0E575 CRC64;
MLCILVLAKT LILLLSRLPL SPSFPLWWRI SITMPKHYRP AGKKKEGNAA RYMTRSQALK
HLQVNLNLFR RLCIVKGIFP REPKKKVKGN HHTYYHVKDI AFLMHEPLLE KFREIKTYQK
KVKKAKAKKN EELARLLLTR QPTYKLDRLI RERYPTFIDA LRDLDDCLTM VHLFAVLPAS
DRENLEVKRV HNCRRLTHEW QAYISRCHAL RKVFVSVKGI YYQAELEGQK ITWLTPHAIQ
QVFTNDVDFG VLLTFLEFYE TLLAFTNFKL YHSLNVKYPP ILDSRLEALA ADLYALSRYI
DASSRGIAVE PKVDASSSSQ SNDREESELR LAQLQHQLPS SEPGALMHLV ADNNKEVEED
EETRLCKSLF KDLKFFLSRE VPRESLLFVL PAFGGMVSWE GEGAPFKEDD ESITHHIIDK
PSAGHQYLSR EYVQPQWIYD CVNARIILPT EKYLVGSIPP PHLSPFVDNE AEGYVPDYAE
TIKRLQAAAR NEVLPLPGVG KEDLEDPQNL LYAGVMSRAE EAEAAKNKKK MAAQEKQYHE
ELKIELTGSK ADVAPVVAEG EESVPDAMQI AQENADMPTL LMSRKKRKLY EAMKIGQKKK
KAGVELIEQR KKKLNDAQSS
//
