ID R0HEK6_9BRAS Unreviewed; 912 AA.
AC R0HEK6;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EOA23470.1};
GN ORFNames=CARUB_v10016662mg {ECO:0000313|EMBL:EOA23470.1};
OS Capsella rubella.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.
OX NCBI_TaxID=81985 {ECO:0000313|EMBL:EOA23470.1, ECO:0000313|Proteomes:UP000029121};
RN [1] {ECO:0000313|Proteomes:UP000029121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Monte Gargano {ECO:0000313|Proteomes:UP000029121};
RX PubMed=23749190; DOI=10.1038/ng.2669;
RA Slotte T., Hazzouri K.M., Agren J.A., Koenig D., Maumus F., Guo Y.L.,
RA Steige K., Platts A.E., Escobar J.S., Newman L.K., Wang W., Mandakova T.,
RA Vello E., Smith L.M., Henz S.R., Steffen J., Takuno S., Brandvain Y.,
RA Coop G., Andolfatto P., Hu T.T., Blanchette M., Clark R.M., Quesneville H.,
RA Nordborg M., Gaut B.S., Lysak M.A., Jenkins J., Grimwood J., Chapman J.,
RA Prochnik S., Shu S., Rokhsar D., Schmutz J., Weigel D., Wright S.I.;
RT "The Capsella rubella genome and the genomic consequences of rapid mating
RT system evolution.";
RL Nat. Genet. 45:831-835(2013).
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DR EMBL; KB870809; EOA23470.1; -; Genomic_DNA.
DR RefSeq; XP_006290572.1; XM_006290510.1.
DR AlphaFoldDB; R0HEK6; -.
DR STRING; 81985.R0HEK6; -.
DR GeneID; 17885404; -.
DR KEGG; crb:17885404; -.
DR eggNOG; KOG2135; Eukaryota.
DR OrthoDB; 5406435at2759; -.
DR Proteomes; UP000029121; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12257; RRM1_RBM26_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR045137; RBM26/27.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR14398; RNA RECOGNITION RRM/RNP DOMAIN; 1.
DR PANTHER; PTHR14398:SF0; ZINC FINGER PROTEIN SWM; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP000029121};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}; Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT DOMAIN 200..228
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 438..510
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT ZN_FING 200..228
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..124
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 315..339
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 628..693
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 805..912
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 593..624
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1..15
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 32..50
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..109
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 315..331
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 628..644
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 651..693
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 805..826
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 868..883
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 884..905
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 912 AA; 99667 MW; 0E9680F6329AD553 CRC64;
MELPVSSQKQ SVLSPPECMS DPEEEHEISE EEDDDRNHKH RRKEETRSQS LEQGSSDQGF
SRPYRKNYRH YENGNSFSEQ DKRSFGAGSG QRVQFDNQRM RSNQMFSRDS GPGRGRGNYG
SWAQRDSRFN PVDLSSHMVQ VGSMAPNMFG GRGLAGVSAA QGAPWPAFGM IPGVPNGGLD
AFHHLQGSLR PPLNAPLNMG IPRQRCRDFE ERGFCLRGDM CPMEHGINRI VVDDVQSLSQ
FNLPVSVPAA PHLAASSKPV PAQFGAASFM NPKGAHGRIN EGGLTVDNLA FGDVYPSGGG
TDFYDPDQPL WNNSAGETSG AISTQNSHGI DENLAPLDDN NQDGTENGCG IRDSRSISQS
VWGRMRGSNS QANSKEKVDA VLNSSAGLED QLKEVSVNIS RHGKQNYVGE SVTKVVDSSN
TSNDAMNNTR KSTQKAMRTL FVNNVPHESN RRDLILSHFQ KFGKVIDIHI PLNTERAFVQ
FSKREEAESA LRAPDAVMGN RFIKLWWANR DSIPDNGLST GNGASMKGRG MAASGGQNQL
PIAAASKSNH VNSMAKGPAF HTGGVPSSEQ SKPVVATNGP KVTLLQQKKA ATLEQLKETL
RIKQEMLDQK RNEYRKKLAT FEKQGTVVKG EEADEPDAKR VKVDTASDSG AAIASPKTES
STDKRVPIQK PLSTCKLSTE SSSPDSKNLK QRPYSFTTSL NAPMANRYKL DNRTTTIKVV
PPLPTGLADV AVLKEHFSSY GEVSKVELED NASIDKGKDH ETHNENRAAC VTFVKRNAAE
KALANAKCWQ EHMLQLVWVT RQSNRESNNN NNNNNNNNSN SVSVSRDLHS SKDKCASVSN
DPKPADEVKA SSTEEPEKTS VSGDNDSTLD KQETKESNND NNKSNHESIE GASSEVIAST
GTDLDQSEQI RE
//