ID R1FWB4_EMIHU Unreviewed; 886 AA.
AC R1FWB4;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=CHAT domain-containing protein {ECO:0000259|Pfam:PF12770};
DE Flags: Fragment;
GN ORFNames=EMIHUDRAFT_69905 {ECO:0000313|EMBL:EOD39971.1};
OS Emiliania huxleyi (Coccolithophore) (Pontosphaera huxleyi).
OC Eukaryota; Haptista; Haptophyta; Prymnesiophyceae; Isochrysidales;
OC Noelaerhabdaceae; Emiliania.
OX NCBI_TaxID=2903 {ECO:0000313|EMBL:EOD39971.1};
RN [1] {ECO:0000313|EMBL:EOD39971.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|EMBL:EOD39971.1};
RG DOE Joint Genome Institute;
RA Read B., Kegel J., Klute M., Kuo A., Lefebvre S.C., Maumus F., Mayer C.,
RA Miller J., Allen A., Bidle K., Borodovsky M., Bowler C., Brownlee C.,
RA Claverie J.-M., Cock M., De Vargas C., Elias M., Frickenhaus S.,
RA Gladyshev V.N., Gonzalez K., Guda C., Hadaegh A., Herman E.,
RA Iglesias-Rodriguez D., Jones B., Lawson T., Leese F., Lin Y.-C.,
RA Lindquist E., Lobanov A., Lucas S., Malik S.-H.B., Marsh M.E., Mock T.,
RA Monier A., Moreau H., Mueller-Roeber B., Napier J., Ogata H., Parker M.,
RA Probert I., Quesneville H., Raines C., Rensing S., Riano-Pachon D.M.,
RA Richier S., Rokitta S., Salamov A., Sarno A.F., Schmutz J., Schroeder D.,
RA Shiraiwa Y., Soanes D.M., Valentin K., Van Der Giezen M., Van Der Peer Y.,
RA Vardi A., Verret F., Von Dassow P., Wheeler G., Williams B., Wilson W.,
RA Wolfe G., Wurch L.L., Young J., Dacks J.B., Delwiche C.F., Dyhrman S.,
RA Glockner G., John U., Richards T., Worden A.Z., Zhang X., Grigoriev I.V.;
RT "Genome variability drives Emilianias global distribution.";
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000013827}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP1516 {ECO:0000313|Proteomes:UP000013827};
RX PubMed=23760476; DOI=10.1038/nature12221;
RA Read B.A., Kegel J., Klute M.J., Kuo A., Lefebvre S.C., Maumus F.,
RA Mayer C., Miller J., Monier A., Salamov A., Young J., Aguilar M.,
RA Claverie J.M., Frickenhaus S., Gonzalez K., Herman E.K., Lin Y.C.,
RA Napier J., Ogata H., Sarno A.F., Shmutz J., Schroeder D., de Vargas C.,
RA Verret F., von Dassow P., Valentin K., Van de Peer Y., Wheeler G.,
RA Dacks J.B., Delwiche C.F., Dyhrman S.T., Glockner G., John U., Richards T.,
RA Worden A.Z., Zhang X., Grigoriev I.V., Allen A.E., Bidle K., Borodovsky M.,
RA Bowler C., Brownlee C., Cock J.M., Elias M., Gladyshev V.N., Groth M.,
RA Guda C., Hadaegh A., Iglesias-Rodriguez M.D., Jenkins J., Jones B.M.,
RA Lawson T., Leese F., Lindquist E., Lobanov A., Lomsadze A., Malik S.B.,
RA Marsh M.E., Mackinder L., Mock T., Mueller-Roeber B., Pagarete A.,
RA Parker M., Probert I., Quesneville H., Raines C., Rensing S.A.,
RA Riano-Pachon D.M., Richier S., Rokitta S., Shiraiwa Y., Soanes D.M.,
RA van der Giezen M., Wahlund T.M., Williams B., Wilson W., Wolfe G.,
RA Wurch L.L.;
RT "Pan genome of the phytoplankton Emiliania underpins its global
RT distribution.";
RL Nature 499:209-213(2013).
RN [3] {ECO:0000313|EnsemblProtists:EOD39971}
RP IDENTIFICATION.
RG EnsemblProtists;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; KB863526; EOD39971.1; -; Genomic_DNA.
DR RefSeq; XP_005792400.1; XM_005792343.1.
DR STRING; 2903.R1FWB4; -.
DR PaxDb; 2903-EOD39971; -.
DR EnsemblProtists; EOD39971; EOD39971; EMIHUDRAFT_69905.
DR GeneID; 17285242; -.
DR KEGG; ehx:EMIHUDRAFT_69905; -.
DR eggNOG; KOG0548; Eukaryota.
DR HOGENOM; CLU_002404_0_1_1; -.
DR OMA; KAIEHHT; -.
DR Proteomes; UP000013827; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR024983; CHAT_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR10098; RAPSYN-RELATED; 1.
DR PANTHER; PTHR10098:SF106; TETRATRICOPEPTIDE REPEAT PROTEIN 28; 1.
DR Pfam; PF12770; CHAT; 1.
DR Pfam; PF13424; TPR_12; 4.
DR Pfam; PF13176; TPR_7; 1.
DR SMART; SM00028; TPR; 10.
DR SUPFAM; SSF48452; TPR-like; 3.
DR PROSITE; PS50005; TPR; 6.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000013827};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 88..121
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 248..281
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 288..321
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 328..361
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 368..401
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REPEAT 408..441
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 607..884
FT /note="CHAT"
FT /evidence="ECO:0000259|Pfam:PF12770"
FT NON_TER 886
FT /evidence="ECO:0000313|EMBL:EOD39971.1"
SQ SEQUENCE 886 AA; 94836 MW; E8D5D1801D72F515 CRC64;
MESKGADASA RAAQVAAVLD AACALRRAHD SNVGWSDDEL LEGAQALVGE GNERLQRGDA
RGALQKYEEC RAFGQAMRDR KRAMAVEGAA VGNLGDAYRR LGQYKKAIEH HTMALAISRE
IGDREGEGNH LGNLGNAYDS LGQYKKAIEH HTMALAICRK IGDREGEGNH LGNLGSAYDS
LGQYKKAIEH HTMALAISRK IGDRQGEGGT LGGLGNAYDS LGQYKKAIEH HTMALAISRE
IGDKQGEGSD LGNLGIAYFR LGQYEKAIEH HTMALAISRE IGDKQVEGNA LGNLGGAYLS
LGQYEKAIEH YTMALKISRE IGDRQGEGNG LGGLGIAYFR LGQYEKAIEH HTMALDICRK
IGHRQGEGGT LGGLGNAYHS LGQYKKAIEH HTMALDINRE IGDRRVEGSA LTNLGTAYLS
LGQYEKALER LAAATAVFDA LWAGLRTDHD RITFGDTIGF TLTPRLLQRV HARLAQPEAA
LEVAERARSR AFELLLAQQR VQRGADAAAA PPPTLPAAVD VAALRGLAGR QRVALVIFSQ
VQDTALLAWV VRGDAPVAFH ELAVPAQGGA SPLTQLVEQT RQTIGAIEAE RGDGRTAAPD
ESYIRAALAR CYKLLIAPLG LSAGEPLLII PDRDLFALPF AALLDSDGKH LIERHSLRIA
PSAGTLIELE QRAADRGAPP PRPPALVVGD PDFSGWTTKG GGHLSQLPGA RAETSVVQGL
LNTFKAKLRL DDEATKEAMM QLLPTSDVIH LATHGAPDGL YFAGESEVEA TLSMAEVQGL
DLRARLVVLS ACDSFKAPKG EGGSELSTDG VVGITRAFVA AGALTLVSSL WKVSDDATRE
LMRRFYTAWV AGGDVAAALR EAMVGMIEEG RWSVREWGAF VVYGMA
//
