ID R1GDQ8_9PSEU Unreviewed; 428 AA.
AC R1GDQ8;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Ricin B lectin {ECO:0000313|EMBL:EOD69388.1};
GN ORFNames=H480_06426 {ECO:0000313|EMBL:EOD69388.1};
OS Amycolatopsis vancoresmycina DSM 44592.
OC Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC Pseudonocardiaceae; Amycolatopsis.
OX NCBI_TaxID=1292037 {ECO:0000313|EMBL:EOD69388.1, ECO:0000313|Proteomes:UP000014139};
RN [1] {ECO:0000313|EMBL:EOD69388.1, ECO:0000313|Proteomes:UP000014139}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 44592 {ECO:0000313|EMBL:EOD69388.1,
RC ECO:0000313|Proteomes:UP000014139};
RA Kumar S., Kaur N., Kaur C., Raghava G.P.S., Mayilraj S.;
RT "Draft genome sequence of Amycolatopsis vancoresmycina strain DSM 44592T.";
RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EOD69388.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AOUO01000068; EOD69388.1; -; Genomic_DNA.
DR AlphaFoldDB; R1GDQ8; -.
DR PATRIC; fig|1292037.4.peg.1253; -.
DR eggNOG; COG3469; Bacteria.
DR Proteomes; UP000014139; Unassembled WGS sequence.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd00161; RICIN; 1.
DR Gene3D; 2.80.10.50; -; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR001223; Glyco_hydro18_cat.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR035992; Ricin_B-like_lectins.
DR InterPro; IPR000772; Ricin_B_lectin.
DR PANTHER; PTHR42976; BIFUNCTIONAL CHITINASE/LYSOZYME-RELATED; 1.
DR PANTHER; PTHR42976:SF1; GH18 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00704; Glyco_hydro_18; 1.
DR Pfam; PF00652; Ricin_B_lectin; 1.
DR SMART; SM00458; RICIN; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF50370; Ricin B-like lectins; 1.
DR PROSITE; PS51910; GH18_2; 1.
DR PROSITE; PS50231; RICIN_B_LECTIN; 1.
PE 4: Predicted;
KW Lectin {ECO:0000313|EMBL:EOD69388.1}.
FT DOMAIN 21..298
FT /note="GH18"
FT /evidence="ECO:0000259|PROSITE:PS51910"
SQ SEQUENCE 428 AA; 43579 MW; 94B4DCCC6569C418 CRC64;
MLSVAVAGVP QAAAAGPAFP AHYAAPYLQI SDADAGDMAA DLNATGTKFF TLAFLTPQSG
CTPVWEANGT GVGSFKAQIS ALQAAGGNVI PSFGGAEGGE LAQTCTNTAS LTAAYANVVN
TYGTPRLDFD IEGGTLGDTA SNQRRNSALA ALQQQNSAVQ VDYTLAVDPS GIPSNELDLL
RDAKNKGVKV SVVNLMVMDF YDGQPVLGDA LSAARASASQ LASLYGISTS AAYAMMGLTP
IAGRNDDGAQ FSQSDAQQLE TFAAQNGVAE LSFWEVQDYD RATGYAYSRI FNAITGGGTT
PPPASGGTIT GYGGKCVDVA GASTANGTAI DLYTCNGTNA QQWTSTSGTL RALGKCLDVA
AAGTANGTKV QLYDCNGTGA QQWNRSGNQL VNPASGKCLD ATGPSSADGT PLQIWTCTGA
ANQSWTLN
//
