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Database: UniProt
Entry: R4K5X9_CLOPA
LinkDB: R4K5X9_CLOPA
Original site: R4K5X9_CLOPA 
ID   R4K5X9_CLOPA            Unreviewed;       182 AA.
AC   R4K5X9;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 50.
DE   SubName: Full=RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGK97973.1};
GN   ORFNames=Clopa_3159 {ECO:0000313|EMBL:AGK97973.1};
OS   Clostridium pasteurianum BC1.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC   Clostridium.
OX   NCBI_TaxID=86416 {ECO:0000313|EMBL:AGK97973.1, ECO:0000313|Proteomes:UP000013523};
RN   [1] {ECO:0000313|EMBL:AGK97973.1, ECO:0000313|Proteomes:UP000013523}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BC1 {ECO:0000313|EMBL:AGK97973.1,
RC   ECO:0000313|Proteomes:UP000013523};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Peters L., Mikhailova N., Teshima H., Detter J.C., Han C., Tapia R.,
RA   Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Dunn J.,
RA   Taghavi S., Francis A., van der Lelie D., Woyke T.;
RT   "Complete sequence of chromosome of Clostridium pasteurianum BC1.";
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP003261; AGK97973.1; -; Genomic_DNA.
DR   RefSeq; WP_015616261.1; NC_021182.1.
DR   AlphaFoldDB; R4K5X9; -.
DR   STRING; 86416.Clopa_3159; -.
DR   KEGG; cpas:Clopa_3159; -.
DR   PATRIC; fig|86416.3.peg.3146; -.
DR   eggNOG; COG1191; Bacteria.
DR   HOGENOM; CLU_014793_8_5_9; -.
DR   OrthoDB; 1926365at2; -.
DR   Proteomes; UP000013523; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 1.20.140.160; -; 1.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR000943; RNA_pol_sigma70.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR007630; RNA_pol_sigma70_r4.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF04545; Sigma70_r4; 1.
DR   PRINTS; PR00046; SIGMA70FCT.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000013523};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          17..74
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          130..179
FT                   /note="RNA polymerase sigma-70 region 4"
FT                   /evidence="ECO:0000259|Pfam:PF04545"
SQ   SEQUENCE   182 AA;  21170 MW;  2F542F1223437162 CRC64;
     MIDVQDHLGL AKLQAGRIYK KFQLSYRYDF DDILQMCHVG LIKAAQKFDK TKGYTFSTYA
     LSLMYGYVLN TILRDKYYPS AERNGSLNSH VLSLDINVNN SMDKEVTYKD AIMDKQEFYT
     EFTGILVRTA LEKLPSKHRE VIKLRYFQGK TQMQIAKLFG TSQTTIGRFE KEGLTKLRRY
     VS
//
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