ID R4V6X0_9GAMM Unreviewed; 670 AA.
AC R4V6X0;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=Putative PAS/PAC sensor protein {ECO:0000313|EMBL:AGM40735.1};
GN ORFNames=SPISAL_03205 {ECO:0000313|EMBL:AGM40735.1};
OS Spiribacter salinus M19-40.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Chromatiales;
OC Ectothiorhodospiraceae; Spiribacter.
OX NCBI_TaxID=1260251 {ECO:0000313|EMBL:AGM40735.1, ECO:0000313|Proteomes:UP000017881};
RN [1] {ECO:0000313|EMBL:AGM40735.1, ECO:0000313|Proteomes:UP000017881}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M19-40 {ECO:0000313|EMBL:AGM40735.1};
RX PubMed=23409269;
RA Leon M.J., Ghai R., Fernandez A.B., Sanchez-Porro C., Rodriguez-Valera F.,
RA Ventosa A.;
RT "Draft Genome of Spiribacter salinus M19-40, an Abundant
RT Gammaproteobacterium in Aquatic Hypersaline Environments.";
RL Genome Announc. 1:E00179-12(2013).
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DR EMBL; CP005963; AGM40735.1; -; Genomic_DNA.
DR AlphaFoldDB; R4V6X0; -.
DR KEGG; ssal:SPISAL_03205; -.
DR eggNOG; COG2176; Bacteria.
DR eggNOG; COG5002; Bacteria.
DR HOGENOM; CLU_017573_0_0_6; -.
DR Proteomes; UP000017881; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF13426; PAS_9; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000017881};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 15..37
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 107..160
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
SQ SEQUENCE 670 AA; 73777 MW; 74E80B9749259020 CRC64;
MAGLATMNRA QGSSAGGALI TAWLISLAGL LVTGIIIDRR LARPLVATAR GADILASSNP
QHHLEISGRH WLDRLPDTLE QLGSALVRNQ QDMDEAAQAV ATKVEARRTR LETILREIRD
GVMVCDREGR IQLYNRTTRD LLSSEPALGL GRNISEVLNE GPLNHTLRLL VPTNENAAPA
DAELVCATAS GERLLRCRVA RLVTDDPETS GFVMTLQDVS RQTRETLRRE QALRDAVESL
RNPLTSLNAA TESLRLAQEE GLHEQTEQFA RIIAEENEKL THRFTTLSDE TASVVTDNWR
LEDVHLGSLI EGIKVSVAAE VIPRLQCRAD VWLSAEPYLL SRVIEALLAR LREELGVTAL
ALSGREEGSL VYVDLNWSGD VIAADQLDHW LDAGLEDVGG TVSLREVLQR HDTTAWSQPD
LSKEGRAMLR LPLPGAPKKA TVVETVPARP EYYDFAIEDA DRPLGDTADA SLETLDYVVF
DCETTGLEPS RGDEIVSIGA VRIHRGQVMH GETFELLANP GRPIPALASS IHGIYDEDVM
EAPPVEEVIR RFHAFAGNAV LVGFNTAFDL RFLKLKQRVT GVRFDNPTLD ALLLSIMLHD
HTGEHTMESI AERLGVGVGG RHTALGDSLT TAEIFMRLID LLPGESIRTL SEAITAQERM
IEFRRQQRAF
//
