ID R4WZL6_9BURK Unreviewed; 499 AA.
AC R4WZL6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=Type-4 uracil-DNA glycosylase {ECO:0000256|ARBA:ARBA00019403};
GN ORFNames=BRPE64_BCDS03100 {ECO:0000313|EMBL:BAN24971.1};
OS Caballeronia insecticola.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Caballeronia.
OX NCBI_TaxID=758793 {ECO:0000313|EMBL:BAN24971.1, ECO:0000313|Proteomes:UP000013966};
RN [1] {ECO:0000313|Proteomes:UP000013966}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23833137; DOI=10.1128/genomeA.00441-13;
RA Shibata T.F., Maeda T., Nikoh N., Yamaguchi K., Oshima K., Hattori M.,
RA Nishiyama T., Hasebe M., Fukatsu T., Kikuchi Y., Shigenobu S.;
RT "Complete Genome Sequence of Burkholderia sp. Strain RPE64, Bacterial
RT Symbiont of the Bean Bug Riptortus pedestris.";
RL Genome Announc. 1:340-344(2013).
RN [2] {ECO:0000313|EMBL:BAN24971.1, ECO:0000313|Proteomes:UP000013966}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RPE64 {ECO:0000313|EMBL:BAN24971.1};
RX PubMed=29863457; DOI=10.1099/ijsem.0.002848;
RA Takeshita K., Tamaki H., Ohbayashi T., Meng X.-Y., Sone T., Mitani Y.,
RA Peeters C., Kikuchi Y., Vandamme P.;
RT "Burkholderia insecticola sp. nov., a gut symbiotic bacterium of the bean
RT bug Riptortus pedestris.";
RL Int. J. Syst. Evol. Microbiol. 68:2370-2374(2018).
CC -!- SIMILARITY: Belongs to the uracil-DNA glycosylase (UDG) superfamily.
CC Type 4 (UDGa) family. {ECO:0000256|ARBA:ARBA00006521}.
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DR EMBL; AP013059; BAN24971.1; -; Genomic_DNA.
DR RefSeq; WP_016354402.1; NC_021294.1.
DR AlphaFoldDB; R4WZL6; -.
DR STRING; 758793.BRPE64_BCDS03100; -.
DR KEGG; buo:BRPE64_BCDS03100; -.
DR PATRIC; fig|758793.3.peg.3218; -.
DR HOGENOM; CLU_046101_1_0_4; -.
DR OrthoDB; 5290748at2; -.
DR Proteomes; UP000013966; Chromosome 2.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004844; F:uracil DNA N-glycosylase activity; IEA:UniProtKB-EC.
DR GO; GO:0006281; P:DNA repair; IEA:UniProt.
DR CDD; cd10030; UDG-F4_TTUDGA_SPO1dp_like; 1.
DR Gene3D; 3.40.470.10; Uracil-DNA glycosylase-like domain; 1.
DR InterPro; IPR023875; DNA_repair_put.
DR InterPro; IPR025404; DUF4130.
DR InterPro; IPR005273; Ura-DNA_glyco_family4.
DR InterPro; IPR005122; Uracil-DNA_glycosylase-like.
DR InterPro; IPR036895; Uracil-DNA_glycosylase-like_sf.
DR NCBIfam; TIGR03915; SAM_7_link_chp; 1.
DR NCBIfam; TIGR00758; UDG_fam4; 1.
DR NCBIfam; TIGR03914; UDG_fam_dom; 1.
DR PANTHER; PTHR33693; TYPE-5 URACIL-DNA GLYCOSYLASE; 1.
DR PANTHER; PTHR33693:SF3; TYPE-5 URACIL-DNA GLYCOSYLASE; 1.
DR Pfam; PF13566; DUF4130; 1.
DR Pfam; PF03167; UDG; 1.
DR SMART; SM00986; UDG; 1.
DR SMART; SM00987; UreE_C; 1.
DR SUPFAM; SSF52141; Uracil-DNA glycosylase-like; 1.
PE 3: Inferred from homology;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723}.
FT DOMAIN 319..469
FT /note="Uracil-DNA glycosylase-like"
FT /evidence="ECO:0000259|SMART:SM00986"
SQ SEQUENCE 499 AA; 55533 MW; E018FB474D1D267F CRC64;
MKCVTIDPSF AAWRTEARNL LMEGLRPEEV SWRETDASAT VFGSIDPPAP GSANPDAKKP
VRIAHKFLAM LETAACYRAP DRWPFLYKAL WRWTQGDRAI ASPEDADGRR LAQMIETVEA
EENKMRKTLR FRHRDVSLGP PEFISWCEPL HDLLEHAAMH FATRMGSATW MIATPHGAAF
WDGALLRVDR TSEPEEKPMD FGDTEMNGEA VSGDAIEALW LAYYESTFAP AQANAAEMAS
HMPVRYWKSP QNERADPALI ARADPYSRRD REPRSVPPEM EVAINTDLEP IQGTMLTAPP
SLDACRRCSL WRNATQAVPG MGPAGARVML VGEQPGDQED RAGTPFVGPS GTLLDEAIAE
AGLARESLYL TNAVKHFKWE AHGEERAHLA PTQREREACR FWLEEELKRV APKVVVALGA
TALKALTGHR TALSEYLGKT IEHKGCIVVP TYHPSYLLRV TDEKVRAEVF GTIVEALVFA
QQIADGTATI RTPVRDRTR
//
