ID R5B4K4_9CLOT Unreviewed; 909 AA.
AC R5B4K4;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Penicillin-binding protein 2 {ECO:0000313|EMBL:CCX50223.1};
GN ORFNames=BN545_01632 {ECO:0000313|EMBL:CCX50223.1};
OS Clostridium sp. CAG:226.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1262781 {ECO:0000313|EMBL:CCX50223.1, ECO:0000313|Proteomes:UP000018047};
RN [1] {ECO:0000313|EMBL:CCX50223.1, ECO:0000313|Proteomes:UP000018047}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:226 {ECO:0000313|Proteomes:UP000018047};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCX50223.1}.
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DR EMBL; CAWN010000119; CCX50223.1; -; Genomic_DNA.
DR AlphaFoldDB; R5B4K4; -.
DR Proteomes; UP000018047; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 2.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 2.
DR Gene3D; 1.10.10.1230; Penicillin-binding protein, N-terminal non-catalytic domain, head sub-domain; 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF2; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE MRDA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 2.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000018047}.
FT DOMAIN 51..359
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 432..608
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
FT DOMAIN 728..883
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
SQ SEQUENCE 909 AA; 101403 MW; 0D0CE9FFD5E1A544 CRC64;
MKKPISRIII VCLLMLCMMG ALIYRLGTLT IKEGEKWAQT ADSRSTQTIA IKGERGRIMD
RNGVVLAYSE TCYNVEFLRN ADNRTSYDSA VYTESLIKAI EIIERSGGQT IDTSYIVMDE
NGEIAYDWRI SGVESSEAIE RVRRIRYKNF CEGMYISIKD PAYKEYPKDP TKWDMDLWPT
AEYAYNYLRK TWYIPEEYTF EQAKKIISIR QEVNLNNYRA YEPITIAYNV GQEVVSEIVE
RSSELVGVQI AQSTTRVYPR GETAAHIVGY LSRNADTVSA AKLIAMGYTR AQLEPYYLKN
DDGTYSMGDD GDYQIKMTDM GYAYSDYIGV SGLEYTMEAY LTGATNEHQG KREVEINKNL
SITRELSYVE ATNGNDVMST IDIELQTVCE NALGSLITKM REQEQQMIEE DAAKPEKDQK
YQGKDITLAS TGAIVVMDPR NGEVLASASY PSYDPNWFMQ GLTKEQSEYL FGEAATDTTP
LRNKAVSARY APGSIFKPLT GVAGVSEGVV GIDEIVNDHG DSGYYYFYSV DENGKTVVQK
QGAPRCWSYR NHTAHANINL TQALTFSCNY YFCEIANRMG IDTLNKWMGK FGLDTKTNIE
LTGETAGVGG GQKVLFDNEL TDSNGELNIT GQKTSLPILI YNRIRERLRE YVTRRSMEID
EQAIRKCALK LMMLQDGKGL DGKGPDIRKI LSDELGIPEG YSITQSWTSE IVTLLNEIQW
KPTQTIRAGF GQGTTLVTPM AIARYVSAIA NEGTVYDANI VERIVDQNGN LIEDKNAAVY
ETIGEDTAEW DALWAAVKQG MAGVVSAEDH GTAGGKFSQE FTEKYLDRIA GKTGSAQVGT
TSIDIENTSW FVSYTPREGE AELVIVICVP SGYAGVWSVS AAEEIYTYYF NKQDSAAPET
LVDIGGIAP
//