ID R5CV76_9FIRM Unreviewed; 157 AA.
AC R5CV76;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=CarD-like/TRCF RNAP-interacting domain-containing protein {ECO:0000259|SMART:SM01058};
GN ORFNames=BN705_00946 {ECO:0000313|EMBL:CCX71810.1};
OS Firmicutes bacterium CAG:555.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1263030 {ECO:0000313|EMBL:CCX71810.1, ECO:0000313|Proteomes:UP000018402};
RN [1] {ECO:0000313|EMBL:CCX71810.1, ECO:0000313|Proteomes:UP000018402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:555 {ECO:0000313|Proteomes:UP000018402};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCX71810.1}.
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DR EMBL; CAWW010000076; CCX71810.1; -; Genomic_DNA.
DR AlphaFoldDB; R5CV76; -.
DR STRING; 1263030.BN705_00946; -.
DR Proteomes; UP000018402; Unassembled WGS sequence.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 1.20.58.1290; CarD-like, C-terminal domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR042215; CarD-like_C.
DR InterPro; IPR048792; CarD_C.
DR PANTHER; PTHR38447:SF1; RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR CARD; 1.
DR PANTHER; PTHR38447; TRANSCRIPTION FACTOR YDEB-RELATED; 1.
DR Pfam; PF21095; CarD_C; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018402}.
FT DOMAIN 1..111
FT /note="CarD-like/TRCF RNAP-interacting"
FT /evidence="ECO:0000259|SMART:SM01058"
SQ SEQUENCE 157 AA; 17569 MW; 2444BC741A6551A7 CRC64;
MFVIGDYIVH PMHGAGVIEN IVSRRISGDE RDYYVLKLPV GDMVVMVPVD GCESIGVRPV
ISHDEAVGIL DAFPDIEVSM TQNWNKRYRE NMEKIKSGNL LEVGEVVKGL MCRDLERGLS
TGERKMLHSA KQILISELVI ALDTDYEHVE QKLSSAI
//
