ID R5CVW6_9BACT Unreviewed; 718 AA.
AC R5CVW6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE SubName: Full=Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CCX68847.1};
GN ORFNames=BN567_02619 {ECO:0000313|EMBL:CCX68847.1};
OS Prevotella sp. CAG:255.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Prevotella.
OX NCBI_TaxID=1262923 {ECO:0000313|EMBL:CCX68847.1, ECO:0000313|Proteomes:UP000017913};
RN [1] {ECO:0000313|EMBL:CCX68847.1, ECO:0000313|Proteomes:UP000017913}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:255 {ECO:0000313|Proteomes:UP000017913};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCX68847.1}.
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DR EMBL; CAWV010000086; CCX68847.1; -; Genomic_DNA.
DR AlphaFoldDB; R5CVW6; -.
DR Proteomes; UP000017913; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR CDD; cd06575; PASTA_Pbp2x-like_2; 1.
DR Gene3D; 3.30.450.330; -; 1.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005543; PASTA_dom.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF1; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE FTSI; 1.
DR Pfam; PF03793; PASTA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SMART; SM00740; PASTA; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
DR SUPFAM; SSF54184; Penicillin-binding protein 2x (pbp-2x), c-terminal domain; 1.
DR PROSITE; PS51178; PASTA; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 16..38
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 657..718
FT /note="PASTA"
FT /evidence="ECO:0000259|PROSITE:PS51178"
SQ SEQUENCE 718 AA; 79741 MW; A66B6019DC5827C7 CRC64;
MSNKFDRKKI IPRYKIIAYV MVVIGIIIIG KAMCIATVER DYWLKVASRL KKDSVDMKPV
RGNILSCDGR LMASSLPEYR LFMDFKAGGE EKDSLWQVKL DSICMGLHEI FPEKSAAKFK
EDLEKGRKKK SQHWPIWKYR VSYDVYSEVK KLPVFNLSKY KSGFHVETYN ARQRPFGSLA
QRTVGDMYGD KDSARCGLEL YYDTILRGKM GKISRRKVMN KYLSITTREP VNGADIVTTI
DVGMQDLAER ALIDELKEIN GNVGVAIVME VKTGDVKAIV NMTKCADGEY REIKNSAVSD
LLEPGSVFKT ASIMVALDDG VVDTTYKVDT GNGIWDMYGA KMRDHNWHRG GYQMLTLPQT
LEYSSNIGVS RIIDKFYHDK PEKFVEGIDR LGLRTDLHLP IVGYAAPKIR MPKKNGKGQY
VNWSKTALPW MSIGYETQVP PISTLTFYNA IANNGTMMRP RFVKQIVKDG EVIAEFPPEV
IKARICKEKT LREIQTILEH VVSQGLGKRA GSTSFKVAGK TGTAQISKGA GGYKSGKVNY
LLSFAGYFPA DDPRYSCIVC IQKSGLPASG GGMSGLVFHN IAEGIMAQSL KLSVEDARDS
LSILMPDVKS GNILAADYVL SHLGISTNKN WSGSYANGNP IWGSAKREAS SVMLTRGPHY
ETKIVPDVIG MGARDAVYIL ESRGVKVRLS GRGKVTQQSL PAGHIIKKGE VCSLKLEI
//