ID R5GD48_9PORP Unreviewed; 646 AA.
AC R5GD48;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:CCY10737.1};
GN ORFNames=BN460_01328 {ECO:0000313|EMBL:CCY10737.1};
OS Porphyromonas sp. CAG:1061.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae;
OC Porphyromonas; environmental samples.
OX NCBI_TaxID=1262916 {ECO:0000313|EMBL:CCY10737.1, ECO:0000313|Proteomes:UP000018064};
RN [1] {ECO:0000313|EMBL:CCY10737.1, ECO:0000313|Proteomes:UP000018064}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:1061 {ECO:0000313|Proteomes:UP000018064};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY10737.1}.
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DR EMBL; CAXO010000200; CCY10737.1; -; Genomic_DNA.
DR RefSeq; WP_021903628.1; NZ_HF988937.1.
DR AlphaFoldDB; R5GD48; -.
DR Proteomes; UP000018064; Unassembled WGS sequence.
DR GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR Gene3D; 1.20.58.100; Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain; 1.
DR Gene3D; 3.90.700.10; Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain; 1.
DR InterPro; IPR003953; FAD-binding_2.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR037099; Fum_R/Succ_DH_flav-like_C_sf.
DR InterPro; IPR015939; Fum_Rdtase/Succ_DH_flav-like_C.
DR InterPro; IPR030664; SdhA/FrdA/AprA.
DR InterPro; IPR011280; Succ_DH/Fum_Rdt_flav_su.
DR InterPro; IPR027477; Succ_DH/fumarate_Rdtase_cat_sf.
DR NCBIfam; TIGR01811; sdhA_Bsu; 1.
DR PANTHER; PTHR11632; SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT; 1.
DR PANTHER; PTHR11632:SF53; SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT; 1.
DR Pfam; PF00890; FAD_binding_2; 1.
DR Pfam; PF02910; Succ_DH_flav_C; 1.
DR PRINTS; PR00368; FADPNR.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR SUPFAM; SSF46977; Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain; 1.
DR SUPFAM; SSF56425; Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain; 1.
PE 4: Predicted;
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002}.
FT DOMAIN 36..448
FT /note="FAD-dependent oxidoreductase 2 FAD binding"
FT /evidence="ECO:0000259|Pfam:PF00890"
FT DOMAIN 510..644
FT /note="Fumarate reductase/succinate dehydrogenase
FT flavoprotein-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF02910"
FT ACT_SITE 338
FT /note="Proton acceptor"
FT /evidence="ECO:0000256|PIRSR:PIRSR630664-50"
SQ SEQUENCE 646 AA; 72169 MW; 7FA8986DB3EE9907 CRC64;
MIKLDAKIPK GPLAEKWNTY KANQKLVNPA NKRRLDIIVV GTGLAGASAA ASLAEMGFHV
ENFCIQDSPR RAHSIAAQGG INAAKNYQND GDSVYRLFYD TIKGGDYRAR EANVYRLAEV
SNAIIDQCVA QGVPFAREYG GTLANRSFGG AQVSRTFYSR GITGQQLLLG AYSALSRMVG
LGKVNLHTRH EMVNLVMVDG RARGIIVRDL VTGKLERFSA HAVVIATGGY GNTFFLSSNA
MECNGSAAWQ CYKKGAAFGN PCMAQIHPTC IPQHGDFQSK LTLMSESLRN DGRIWVPKKK
EDAEAIRAGK LRPTEIKEED RDYYLERRYP AFGNLVPRDV ASRAAKERCD AGYGVGTGNA
VYLDFAEPIQ RLGLKVVEER YGNLFQMYEK ITNDDPYKTP MMIFPAIHYT MGGLWVDYEL
QTTIPGLFAI GESNFSDHGA NRLGASALMQ GLADGYFVLP YTIQNYLSDQ IQVPRFSTDL
PEFDAAEKEV TDRIHKLMNI KGKQSVDDLH KKLGHIMWDY VGMGRDEAGL KKGLELIAEV
KKEFWSDLFI PGQAIDLNVE LEKALRLADF IEIGELMAHD ALDRKESCGG HFRLEYQTEE
GEALRDDENF AYVSCWEYQG EDKAPVMYKE PLDYEFVVRA QRNYKS
//
