ID R5IDU1_9FIRM Unreviewed; 343 AA.
AC R5IDU1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
GN ORFNames=BN480_01449 {ECO:0000313|EMBL:CCY40240.1};
OS Firmicutes bacterium CAG:124.
OC Bacteria; Bacillota.
OX NCBI_TaxID=1263002 {ECO:0000313|EMBL:CCY40240.1, ECO:0000313|Proteomes:UP000018269};
RN [1] {ECO:0000313|EMBL:CCY40240.1, ECO:0000313|Proteomes:UP000018269}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:124 {ECO:0000313|Proteomes:UP000018269};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY40240.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CAYD010000059; CCY40240.1; -; Genomic_DNA.
DR AlphaFoldDB; R5IDU1; -.
DR Proteomes; UP000018269; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR025246; IS30-like_HTH.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033563; transpos_IS30; 1.
DR PANTHER; PTHR10948; TRANSPOSASE; 1.
DR PANTHER; PTHR10948:SF23; TRANSPOSASE INSI FOR INSERTION SEQUENCE ELEMENT IS30A-RELATED; 1.
DR Pfam; PF13936; HTH_38; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000018269}.
FT DOMAIN 169..340
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 343 AA; 39658 MW; C7A4EBC5DD26B4AD CRC64;
MGENYQHLTW RERLIIETRL KDGWSKQRIA DELGRHVSTI YREIKRGLGI QRTTELIDRE
CYIPDIAQAR YEDHYPDKGP GLKIGKDHRL ARYLEAALKG GNRSPEAALG EIKAKGLVFD
TEISVRTLYR YIDLGLFIEV TNKDLPHKTA KKRGYRRVRA ARAPKGLSIE QRPEEINSRE
TFGHWEMDTV QGIQKSRPRL LVLTERLSRH EIMIPIKTNT TESVVKALNT LERKYGALFY
KVFQSITVDN GPEFADCAGM EKACRRKGAR TTVYYCHPYS SWERGSNERQ NGMIRRKHPK
GTDFATIPAS TLKKTEEWIN NYPRKIFNFH TAAEVFEACV NSL
//