ID R5MGF2_9BACE Unreviewed; 291 AA.
AC R5MGF2;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=TIGR00255-like family protein {ECO:0000313|EMBL:CCY90548.1};
GN ORFNames=BN461_00197 {ECO:0000313|EMBL:CCY90548.1};
OS Bacteroides sp. CAG:1076.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=1262735 {ECO:0000313|EMBL:CCY90548.1, ECO:0000313|Proteomes:UP000018060};
RN [1] {ECO:0000313|EMBL:CCY90548.1, ECO:0000313|Proteomes:UP000018060}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:1076 {ECO:0000313|Proteomes:UP000018060};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000256|ARBA:ARBA00001968};
CC -!- SIMILARITY: Belongs to the YicC/YloC family.
CC {ECO:0000256|ARBA:ARBA00035648}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCY90548.1}.
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DR EMBL; CAZB010000057; CCY90548.1; -; Genomic_DNA.
DR AlphaFoldDB; R5MGF2; -.
DR Proteomes; UP000018060; Unassembled WGS sequence.
DR GO; GO:0004521; F:RNA endonuclease activity; IEA:InterPro.
DR InterPro; IPR013551; YicC-like_C.
DR InterPro; IPR013527; YicC-like_N.
DR InterPro; IPR005229; YicC/YloC-like.
DR NCBIfam; TIGR00255; YicC/YloC family endoribonuclease; 1.
DR PANTHER; PTHR30636; UNCHARACTERIZED; 1.
DR PANTHER; PTHR30636:SF3; UPF0701 PROTEIN YICC; 1.
DR Pfam; PF08340; DUF1732; 1.
DR Pfam; PF03755; YicC_N; 1.
PE 3: Inferred from homology;
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722}.
FT DOMAIN 2..156
FT /note="Endoribonuclease YicC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03755"
FT DOMAIN 207..290
FT /note="Endoribonuclease YicC-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF08340"
SQ SEQUENCE 291 AA; 33631 MW; B94B20C67D6A083A CRC64;
MIQSMTGYGK ATATFGDKKI NVEIKSLNSK AMDLSTRIAP LYREKEMEIR NLITKTLERG
KVDFCIWIEK DAAETATPIN AALVENYYNQ IKAISDNCHI PVPEDWFATL LRMPDVLTRV
DIQELSDEEW TVASKAIEEA LQHLVDFRKQ EGAALEKKFT EKVDNIERLL KSIEPYEKER
VTKIRERITD ALEKTISVDY DKNRLEQELI YYIEKLDINE EKQRLANHLK YFRETMAGGH
GQGKKLGFIA QEMGREINTT GSKSNHAEMQ NIVVQMKDEL EQIKEQVLNV M
//
