ID R5QDH6_9FIRM Unreviewed; 422 AA.
AC R5QDH6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=Zinc-ribbon domain-containing protein {ECO:0000259|Pfam:PF13240};
GN ORFNames=BN734_00536 {ECO:0000313|EMBL:CCZ26618.1};
OS [Ruminococcus] torques CAG:61.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae;
OC Mediterraneibacter.
OX NCBI_TaxID=1263108 {ECO:0000313|EMBL:CCZ26618.1, ECO:0000313|Proteomes:UP000017998};
RN [1] {ECO:0000313|EMBL:CCZ26618.1, ECO:0000313|Proteomes:UP000017998}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:61 {ECO:0000313|Proteomes:UP000017998};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCZ26618.1}.
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DR EMBL; CAZS010000129; CCZ26618.1; -; Genomic_DNA.
DR RefSeq; WP_004847805.1; NZ_HF995124.1.
DR AlphaFoldDB; R5QDH6; -.
DR GeneID; 60884119; -.
DR Proteomes; UP000017998; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR026870; Zinc_ribbon_dom.
DR Pfam; PF13290; CHB_HEX_C_1; 2.
DR Pfam; PF13432; TPR_16; 1.
DR Pfam; PF13240; zinc_ribbon_2; 1.
DR SMART; SM00028; TPR; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000017998};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 123..142
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 2..24
FT /note="Zinc-ribbon"
FT /evidence="ECO:0000259|Pfam:PF13240"
FT REPEAT 180..213
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 76..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 76..111
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 422 AA; 47475 MW; B1B00B34E7999E32 CRC64;
MKCVHCGANI PDDQMICPVC GAEVQIVPDY NPLDDVLARE VRGSVEGATR QIRTDDIRRY
RREDLTKNIN STRVLSEDEM ERIRSNRRKS TNNTERNSAE LRRQRQARQQ KRLEAAKRKR
RRLLLTLAAV VILIGFGIYV AYQNSYTGML KKGYRAVNEK EYMAAEKYFD RAIIKDKSRP
DAYVGLAEIY LDQNDTDGAE DVYLSAIETQ PTNEKLYQAA IDFYMETKQP EKVASLLEDC
EDDNVLASVS EYVCEAPEFK PEEGTYKEVQ EITISSDTEG EIYYTTDGTD PTAKTGKKYK
EPILLEKEGT TEIRAIVVNM KGIPSGVISQ TYTIEFPIAD APAVTPSTGR YTDPQKITIT
VPDGYTAYYT TDGSEPTASS EKYTGPIDMP ANTTTTFNAV LINNRNGKAT EVTTRSYITT
AE
//
