ID R5UC71_9BACE Unreviewed; 416 AA.
AC R5UC71;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CCZ73214.1};
GN ORFNames=BN535_02907 {ECO:0000313|EMBL:CCZ73214.1};
OS Bacteroides caccae CAG:21.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=1263037 {ECO:0000313|EMBL:CCZ73214.1, ECO:0000313|Proteomes:UP000017990};
RN [1] {ECO:0000313|EMBL:CCZ73214.1, ECO:0000313|Proteomes:UP000017990}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:21 {ECO:0000313|Proteomes:UP000017990};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the membrane fusion protein (MFP) (TC 8.A.1)
CC family. {ECO:0000256|ARBA:ARBA00009477}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCZ73214.1}.
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DR EMBL; CBAN010000097; CCZ73214.1; -; Genomic_DNA.
DR AlphaFoldDB; R5UC71; -.
DR Proteomes; UP000017990; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR Gene3D; 2.40.30.170; -; 1.
DR Gene3D; 2.40.420.20; -; 1.
DR Gene3D; 2.40.50.100; -; 1.
DR Gene3D; 1.10.287.470; Helix hairpin bin; 1.
DR InterPro; IPR006143; RND_pump_MFP.
DR NCBIfam; TIGR01730; RND_mfp; 1.
DR PANTHER; PTHR32347; EFFLUX SYSTEM COMPONENT YKNX-RELATED; 1.
DR PANTHER; PTHR32347:SF14; EFFLUX SYSTEM COMPONENT YKNX-RELATED; 1.
DR Pfam; PF13437; HlyD_3; 1.
DR SUPFAM; SSF111369; HlyD-like secretion proteins; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 16..37
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT COILED 110..137
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 416 AA; 48107 MW; F83C1947F08A718C CRC64;
MDIKLEKKPW YIRYRYYLTG GLLFISFLIY VIVLSLGPRK LRVDAENIQI AEVKDADFME
YVDVEGLIQP ILTIKVNTRE AGSVESIVGE EGSLLQQGDT ILILSNPDLL RNIEDQRDEW
EKQMITYQEQ EIEMEQKSLN LKQQALTNNY ELERLKKSIA LDREEYQMGV KSKAQLQVAE
DEYNYKQKNA ALQQESLRHD SAVTMIRKEL IRNDRERERK KYERVHERLN NLVVTAPIKG
QLSFVKVTPG QQVSSGESIA EIKVLDQYKI HTSLSEYYID RITTGLPATI NYQGKKYPLR
ITKVVPEVKD RMFDVDLVFT DDMPDNVRVG KSFRVQIELG QPEQTLIIPR GNFYQATGGQ
WIYKVNASKT KAVRVPLSVG RQNPQQYEIT EGLRPGDWVI TTGYDTFGDA EELILR
//