ID R5VKQ6_9CLOT Unreviewed; 133 AA.
AC R5VKQ6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=Small ribosomal subunit protein uS8 {ECO:0000256|ARBA:ARBA00035258, ECO:0000256|HAMAP-Rule:MF_01302};
GN Name=rpsH {ECO:0000256|HAMAP-Rule:MF_01302};
GN ORFNames=BN512_00155 {ECO:0000313|EMBL:CCZ91308.1};
OS Clostridium sp. CAG:167.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1262777 {ECO:0000313|EMBL:CCZ91308.1, ECO:0000313|Proteomes:UP000018023};
RN [1] {ECO:0000313|EMBL:CCZ91308.1, ECO:0000313|Proteomes:UP000018023}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:167 {ECO:0000313|Proteomes:UP000018023};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA central domain where it helps coordinate assembly of the
CC platform of the 30S subunit. {ECO:0000256|HAMAP-Rule:MF_01302}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts proteins S5 and
CC S12. {ECO:0000256|HAMAP-Rule:MF_01302}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS8 family.
CC {ECO:0000256|ARBA:ARBA00006471, ECO:0000256|HAMAP-Rule:MF_01302,
CC ECO:0000256|RuleBase:RU003660}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCZ91308.1}.
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DR EMBL; CBAV010000150; CCZ91308.1; -; Genomic_DNA.
DR AlphaFoldDB; R5VKQ6; -.
DR STRING; 1262777.BN512_00155; -.
DR Proteomes; UP000018023; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.1370.30; -; 1.
DR Gene3D; 3.30.1490.10; -; 1.
DR HAMAP; MF_01302_B; Ribosomal_S8_B; 1.
DR InterPro; IPR000630; Ribosomal_uS8.
DR InterPro; IPR047863; Ribosomal_uS8_CS.
DR InterPro; IPR035987; Ribosomal_uS8_sf.
DR PANTHER; PTHR11758:SF4; 37S RIBOSOMAL PROTEIN S8, MITOCHONDRIAL; 1.
DR PANTHER; PTHR11758; 40S RIBOSOMAL PROTEIN S15A; 1.
DR Pfam; PF00410; Ribosomal_S8; 1.
DR SUPFAM; SSF56047; Ribosomal protein S8; 1.
DR PROSITE; PS00053; RIBOSOMAL_S8; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000018023};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274, ECO:0000256|HAMAP-
KW Rule:MF_01302};
KW Ribosomal protein {ECO:0000256|ARBA:ARBA00022980, ECO:0000256|HAMAP-
KW Rule:MF_01302};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_01302};
KW rRNA-binding {ECO:0000256|ARBA:ARBA00022730, ECO:0000256|HAMAP-
KW Rule:MF_01302}.
SQ SEQUENCE 133 AA; 14541 MW; D1C4844935B15F71 CRC64;
MTMSDPIADM LTRIRNANTA KHDTVDVPAS KMKTAIAEIL LKEGYIKSFE IVEVDGFNSI
HITLKYGKDK NEKIISGLKR ISKPGLRIYA GAEELPKVLG GLGIAIISTN KGILTDKEAR
KENVGGEVLA FVW
//