ID R5XZ80_9FIRM Unreviewed; 416 AA.
AC R5XZ80;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=Putative capsule biosynthesis protein {ECO:0000313|EMBL:CDA19895.1};
GN ORFNames=BN680_00909 {ECO:0000313|EMBL:CDA19895.1};
OS Ruminococcus sp. CAG:488.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Ruminococcus.
OX NCBI_TaxID=1262959 {ECO:0000313|EMBL:CDA19895.1, ECO:0000313|Proteomes:UP000018248};
RN [1] {ECO:0000313|EMBL:CDA19895.1, ECO:0000313|Proteomes:UP000018248}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:488 {ECO:0000313|Proteomes:UP000018248};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the CapA family.
CC {ECO:0000256|ARBA:ARBA00005662}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA19895.1}.
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DR EMBL; CBBI010000082; CDA19895.1; -; Genomic_DNA.
DR AlphaFoldDB; R5XZ80; -.
DR STRING; 1262959.BN680_00909; -.
DR Proteomes; UP000018248; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR Gene3D; 3.60.21.10; -; 1.
DR InterPro; IPR019079; Capsule_synth_CapA.
DR InterPro; IPR029052; Metallo-depent_PP-like.
DR PANTHER; PTHR33393:SF12; LIPOPROTEIN-RELATED; 1.
DR PANTHER; PTHR33393; POLYGLUTAMINE SYNTHESIS ACCESSORY PROTEIN RV0574C-RELATED; 1.
DR Pfam; PF09587; PGA_cap; 1.
DR SMART; SM00854; PGA_cap; 1.
DR SUPFAM; SSF56300; Metallo-dependent phosphatases; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023277};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..34
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 67..325
FT /note="Capsule synthesis protein CapA"
FT /evidence="ECO:0000259|SMART:SM00854"
SQ SEQUENCE 416 AA; 45608 MW; 43D33C86CAB93AB5 CRC64;
MKDNLKWTKS RVFLISINCI LSVAIVVSAM MIVIDKSRIK NGAVFTGGEK ETTASDSSVS
GTAGSARLMI AGDNVVYKTV YTQANQKAGG SGYDFSSAYD GIKEIIAKSD IAMVSQNTVM
DDKNEPSASP EFNTPDQMLD KLLDLGFDVF NQANDHIMDM GLSGAINDIA LFKAKENQAL
LTGLYENKEE MMKPQVKEVN GIKISFVGIT QSLGDYELSE ETDIGILNLS DSRSTSDELE
GTMKQLVESA KNASDIVCVT VHWDGESTSE LSDTQKDIIS KLLKYGVDII VGTGKNDLQK
FEYRSNGDGE QALVIPSLGK VISLEESVDS FLGGIADITV SKDPKTNKTH VSSAKLIPTV
TVYEEDYANV RVLPFAKCTE DIIKKHGFVL EDETFTYSYI KNYYNQKFSD TLELNY
//