ID R5YF80_9MOLU Unreviewed; 635 AA.
AC R5YF80;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=Stage V sporulation protein D {ECO:0000313|EMBL:CDA23414.1};
GN ORFNames=BN735_00586 {ECO:0000313|EMBL:CDA23414.1};
OS Mycoplasma sp. CAG:611.
OC Bacteria; Mycoplasmatota; Mollicutes; Mycoplasmataceae; Mycoplasma.
OX NCBI_TaxID=1262905 {ECO:0000313|EMBL:CDA23414.1, ECO:0000313|Proteomes:UP000018049};
RN [1] {ECO:0000313|EMBL:CDA23414.1, ECO:0000313|Proteomes:UP000018049}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:611 {ECO:0000313|Proteomes:UP000018049};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA23414.1}.
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DR EMBL; CBBK010000076; CDA23414.1; -; Genomic_DNA.
DR AlphaFoldDB; R5YF80; -.
DR STRING; 1262905.BN735_00586; -.
DR Proteomes; UP000018049; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005543; PASTA_dom.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR InterPro; IPR011927; SpoVD_pbp.
DR NCBIfam; TIGR02214; spoVD_pbp; 1.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF19; STAGE V SPORULATION PROTEIN D; 1.
DR Pfam; PF03793; PASTA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SMART; SM00740; PASTA; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
DR SUPFAM; SSF54184; Penicillin-binding protein 2x (pbp-2x), c-terminal domain; 1.
DR PROSITE; PS51178; PASTA; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000018049};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..30
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 577..635
FT /note="PASTA"
FT /evidence="ECO:0000259|PROSITE:PS51178"
SQ SEQUENCE 635 AA; 71227 MW; C7426C70A395D3BE CRC64;
MFQTKINERI RLILVIFILL FLIILVRIVY VQTIEYKKLS LLADDLWSRE LPITAERGKI
LDRNGVILAT NKTTSTLIII PNQVEDKKYT AKIISEILNV SYDTIYERVN KKSSIERVHP
EGRRLNKDIA DKIISYNLPG VYLVKESQRY YPYGDLLSHT LGYVGIDNQG LAGIELMYDS
YLKGTDGAIK YYSDAKGNRL DKKEVYESPV SGMDIVLTID YNIQKSIERE LDNIVDILNP
DNALVVAMNP NTGEILGMGS RPGYDPNNYS KYNMETISRN LPIWMTYEPG STFKIITTAS
AVEEGVVNLE KDTFYDTGSV KVTGSTLRCW KAGGHGHQTF LQVFENSCNP GFVSLGFKLG
KEKLFSYIDL FGFGEQTGID LNGEGSGIIF SLNNVHDLEL ATTAFGQGVS VTPIQQVTAV
SSIVNGGYLY KPYVLNNIYD SNTNTIFYQN QKSLVRKTIS SNTSKIMRMA LESVVARGGG
KKVYIDGYRV GGKTGTAQKV QNGSYLANNY IMSFMAVLPA PNPEVVLYLA IDNPKKTALL
SSYTTTPYVR KILLDIINIM KIEKQSNQIE KDYEWNDKKY YEVENVIGKT KSEAKKLLTG
FDISYVGDGN IVKEQTPKAG ERYYQSGKIR LLMGE
//
