ID R5YJQ0_9FIRM Unreviewed; 559 AA.
AC R5YJQ0;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=GGDEF domain-containing protein {ECO:0000259|PROSITE:PS50887};
GN ORFNames=BN528_01743 {ECO:0000313|EMBL:CDA24939.1};
OS Roseburia sp. CAG:197.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae; Roseburia.
OX NCBI_TaxID=1262943 {ECO:0000313|EMBL:CDA24939.1, ECO:0000313|Proteomes:UP000018336};
RN [1] {ECO:0000313|EMBL:CDA24939.1, ECO:0000313|Proteomes:UP000018336}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:197 {ECO:0000313|Proteomes:UP000018336};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA24939.1}.
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DR EMBL; CBBL010000152; CDA24939.1; -; Genomic_DNA.
DR AlphaFoldDB; R5YJQ0; -.
DR Proteomes; UP000018336; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF17874; TPR_MalT; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00028; TPR; 2.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Reference proteome {ECO:0000313|Proteomes:UP000018336}.
FT DOMAIN 410..547
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT COILED 352..379
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 559 AA; 65426 MW; AD3FC6C301B1C057 CRC64;
MDRESLVCYE KGGRRVNFDN YTDEVNEWRR LVLQSRGIDA AQTLQYSGKI IAYGEQHNDA
FLLGFGYYYS GETYFTLNDG SHFFETINRA LSYLDQAEEW ELMVRCYNYL GIAAMNRGNA
PIALDYYLNG LNYAKEHQIE ELIIYLYINM GMLYNECGRY KDAEESLRDA YACVQKHPED
EIYHICMIGI YNNLIRSLVF QNRLKEVAPI LEEIYQVHWP YCEVYDKLSI CCVEVLYYHR
LGDVAHRDES VRMIDEILPE NLVVLDLFND FYNCCTVLLE TDLDASFWHI IEMLEPLARN
FNIINLQLKI LSLKMQFYRK HDQSAEFLQA AGLYYELSTR MENEARGIMG NVIELRKKLE
SVKKARQKAE QEKMILQKKS ELDALTGMAN RYRLNDFSDE IFAQALQDET PLTVEILDVD
YFKEFNDNYG HQRGDECLLT IANVIKKLTE EYDAFCARYG GDEFVIIIKG ISHDEMVAFC
SKLRERVLDC GLEHRYSKVM PMVTISQGAC WGIPLRGNRM WDYLHVADDM LYKVKNFSRN
NYCIGDIMES DDIVMDLSQ
//
