ID R5YY63_9FIRM Unreviewed; 475 AA.
AC R5YY63;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE SubName: Full=Glycolate oxidase {ECO:0000313|EMBL:CDA31810.1};
GN ORFNames=BN562_00071 {ECO:0000313|EMBL:CDA31810.1};
OS Lachnospiraceae bacterium CAG:25.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=1262984 {ECO:0000313|EMBL:CDA31810.1, ECO:0000313|Proteomes:UP000018334};
RN [1] {ECO:0000313|EMBL:CDA31810.1, ECO:0000313|Proteomes:UP000018334}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:25 {ECO:0000313|Proteomes:UP000018334};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000256|ARBA:ARBA00001974};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA31810.1}.
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DR EMBL; CBBP010000068; CDA31810.1; -; Genomic_DNA.
DR AlphaFoldDB; R5YY63; -.
DR Proteomes; UP000018334; Unassembled WGS sequence.
DR GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR GO; GO:0071949; F:FAD binding; IEA:InterPro.
DR Gene3D; 3.30.465.10; -; 1.
DR Gene3D; 3.30.70.2740; -; 1.
DR InterPro; IPR004113; FAD-bd_oxidored_4_C.
DR InterPro; IPR016166; FAD-bd_PCMH.
DR InterPro; IPR036318; FAD-bd_PCMH-like_sf.
DR InterPro; IPR016169; FAD-bd_PCMH_sub2.
DR InterPro; IPR016164; FAD-linked_Oxase-like_C.
DR InterPro; IPR006094; Oxid_FAD_bind_N.
DR InterPro; IPR016171; Vanillyl_alc_oxidase_C-sub2.
DR PANTHER; PTHR42934; GLYCOLATE OXIDASE SUBUNIT GLCD; 1.
DR PANTHER; PTHR42934:SF2; GLYCOLATE OXIDASE SUBUNIT GLCD; 1.
DR Pfam; PF02913; FAD-oxidase_C; 1.
DR Pfam; PF01565; FAD_binding_4; 1.
DR SUPFAM; SSF56176; FAD-binding/transporter-associated domain-like; 1.
DR SUPFAM; SSF55103; FAD-linked oxidases, C-terminal domain; 1.
DR PROSITE; PS51387; FAD_PCMH; 1.
PE 4: Predicted;
KW FAD {ECO:0000256|ARBA:ARBA00022827};
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630}.
FT DOMAIN 43..222
FT /note="FAD-binding PCMH-type"
FT /evidence="ECO:0000259|PROSITE:PS51387"
SQ SEQUENCE 475 AA; 51587 MW; B72F972E034CDB94 CRC64;
MSEYQYNKVT PEMIEKFKEI APKRVLVGDE INEDFTHDEM AIYGKARPEV LVEATSTEEV
AAVVKLCNEN KVPVTPSGAR TGLVGGAVSI GGGVMISLTK MNKILGYDKE NFVVKIQSGV
LLNDLAQDAE KQGLLYPPDP GEKFATVGGN VATNAGGMRA VKYGCTRDYV RAMTVVLPTG
EIVKLGATVS KTSSGYSLLN LMIGSEGTLG IITELTLKVI PAPKSVISLI IPYENLEDCI
ATVPQFFMHH LAPQALEFME KEVVMDTEKF LGKQVYPKEL EGTEIGAYLL ATFDGNSEEQ
LEDIIEQASE VVLEAGAIDV LVADTPALKK DAWAVRGALL EAIEADTVLL DECDVVVPTN
KIAEFLTYTK SLEAEADFRV KSFGHAGDGN LHIYTCSNDM EEGEFKKQVA VFMDKVYAKA
TEFGGMISGE HGIGHGKMDY LAESLGPVQM RIMEGVKEVF DPNMILNPGK ICYKL
//