ID R6DQC6_9CLOT Unreviewed; 660 AA.
AC R6DQC6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=Putative methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:CDA86516.1};
GN ORFNames=BN547_01360 {ECO:0000313|EMBL:CDA86516.1};
OS Clostridium sp. CAG:230.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1262782 {ECO:0000313|EMBL:CDA86516.1, ECO:0000313|Proteomes:UP000017961};
RN [1] {ECO:0000313|EMBL:CDA86516.1, ECO:0000313|Proteomes:UP000017961}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:230 {ECO:0000313|Proteomes:UP000017961};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the methyl-accepting chemotaxis (MCP) protein
CC family. {ECO:0000256|ARBA:ARBA00029447}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDA86516.1}.
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DR EMBL; CBCQ010000095; CDA86516.1; -; Genomic_DNA.
DR AlphaFoldDB; R6DQC6; -.
DR STRING; 1262782.BN547_01360; -.
DR Proteomes; UP000017961; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:UniProtKB-KW.
DR CDD; cd06225; HAMP; 1.
DR Gene3D; 1.10.8.500; HAMP domain in histidine kinase; 1.
DR Gene3D; 1.10.287.950; Methyl-accepting chemotaxis protein; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR004089; MCPsignal_dom.
DR PANTHER; PTHR32089:SF92; LYSOZYME-LIKE PROTEIN-RELATED; 1.
DR PANTHER; PTHR32089; METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPB; 1.
DR Pfam; PF00672; HAMP; 1.
DR Pfam; PF00015; MCPsignal; 1.
DR SMART; SM00304; HAMP; 1.
DR SMART; SM00283; MA; 1.
DR SUPFAM; SSF58104; Methyl-accepting chemotaxis protein (MCP) signaling domain; 1.
DR PROSITE; PS50111; CHEMOTAXIS_TRANSDUC_2; 1.
DR PROSITE; PS50885; HAMP; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000017961};
KW Transducer {ECO:0000256|ARBA:ARBA00023224, ECO:0000256|PROSITE-
KW ProRule:PRU00284}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..33
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 303..355
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT DOMAIN 360..624
FT /note="Methyl-accepting transducer"
FT /evidence="ECO:0000259|PROSITE:PS50111"
SQ SEQUENCE 660 AA; 71270 MW; FB9B2FFF2C593F2B CRC64;
MKKDKTISIK AKLLGTIIPV VIVIVVVLVV VAYQISAGII EDNAANLLKT SVGSQESKIE
AWINENLASF QMAKKTIEDM HADDDQIQKI LDGYYNYSEN YPNGLYLADS DGKILKASKS
TKEENNATDS TWYKEGLTRV NMAVGTAYKN AEGENVISAS GILNDGSDDV RVISADMSLD
RIAVIVNSFI EMDGAEALLV DKNSGMILAN RDSALISKTL GESGQSALYR KIAKKISQKN
YDFTTLDGNM TVFDEVNGTD WILVSYIPKS VVLSELSNLR NIMLIISLIC ILILCVLIER
MTHVVISPVK KMTKVITAMA GGDFTVSMKV KGKDEIAVMG RSVEQFIESM KQMIKKIEEV
SGKLKEQADA SKNVSGEMNE AAGIQSQSMG EMNSTVDQLS ISVNEIAQNA TQLAGVVADT
KSDSDTVENR MKETVEVSEK GREDMERVGE ALGNIEVSIH NLETAVNKVG TASGEIVQII
NLIGEIADET NLLSLNASIE AARAGEAGKG FAVVASEIGK LAQNSTESVA NITNLIAEIN
RLVEDAVRQA GNSAGDISES AQLIQTAVDT FDTIFKNIQD TSHLINNVVD EINKVDEVAS
NVAAISEEQA ASSDEILATS ESMLNQAENI SKNSQQVEEE SDKLAISADH LADQIKQFKI
//
