ID R6KML6_9BACE Unreviewed; 621 AA.
AC R6KML6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Penicillin-binding protein 2 {ECO:0000313|EMBL:CDB71206.1};
GN ORFNames=BN506_00271 {ECO:0000313|EMBL:CDB71206.1};
OS Bacteroides cellulosilyticus CAG:158.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=1263038 {ECO:0000313|EMBL:CDB71206.1, ECO:0000313|Proteomes:UP000018191};
RN [1] {ECO:0000313|EMBL:CDB71206.1, ECO:0000313|Proteomes:UP000018191}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:158 {ECO:0000313|Proteomes:UP000018191};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDB71206.1}.
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DR EMBL; CBEB010000190; CDB71206.1; -; Genomic_DNA.
DR AlphaFoldDB; R6KML6; -.
DR Proteomes; UP000018191; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR GO; GO:0009002; F:serine-type D-Ala-D-Ala carboxypeptidase activity; IEA:InterPro.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR InterPro; IPR017790; Penicillin-binding_protein_2.
DR NCBIfam; TIGR03423; pbp2_mrdA; 1.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF2; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE MRDA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000018191};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..31
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 54..222
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 261..579
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
SQ SEQUENCE 621 AA; 69587 MW; 8BB5577ED0E62EEE CRC64;
MAKDYTLEKR KFVIGGVAIV IVIIYIMRLF VLQIMTDTYK KNADSNAFLN KIQYPSRGAI
YDRNGKLLVF NQPAYDITFV PREVTELDTL DFCRTLNITK EQLLKRMKDV KNRWMNPGYS
RYTHQVFMTQ LSAEECGVFQ EKLFKFPGFY IQRRTIRQYT YNSAGHALGD IGEVSMRDIE
ADDYYIRGDY VGKQGIEKSY EKYLRGEKGV EVLLRDAHGR IQGHYMDGKL DRPSIPGKNL
KLGLDIDLQM LGERLMKNKI GAIVAIEPET GEILCLVSAP NFDPHLMIGR QRGKNHNMLQ
RDKQKPLLNR AIMGVYPPGS TFKTAQALTF LQEGIIQPST SFPCSHGFIY GGLRVGCHGH
GSPLPLIPAI ATSCNAYFCW GLYRMFGDKK YGSPQNALTV WKDHMVSQGF GYKLGTDLPG
EKRGFIPNAG VYDKAYRGSW NGLTVISISI GQGEVLSTPL QMANLAATIA NRGYFVTPHI
VKDIQDAELD STYRERRYTS IDRSYYEEIV EGMRAAVTGV TGSATCRIAG TILPGVEVCG
KTGTAQNRGH DHSAFIGFAP MDKPKIAIAV YVENGGWGAT YGVPYGALMM EQYLNGKLSP
ASEERAEEMS NRVIMYGDEE R
//