ID R6L0S4_9FIRM Unreviewed; 539 AA.
AC R6L0S4;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=Glycoside Hydrolase Family 43 candidate b-xylosidase or a-L-arabinofuranosidase {ECO:0000313|EMBL:CDB67927.1};
GN ORFNames=BN564_01581 {ECO:0000313|EMBL:CDB67927.1};
OS Eubacterium sp. CAG:252.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Eubacteriaceae;
OC Eubacterium.
OX NCBI_TaxID=1262887 {ECO:0000313|EMBL:CDB67927.1, ECO:0000313|Proteomes:UP000017970};
RN [1] {ECO:0000313|EMBL:CDB67927.1, ECO:0000313|Proteomes:UP000017970}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:252 {ECO:0000313|Proteomes:UP000017970};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 43 family.
CC {ECO:0000256|ARBA:ARBA00009865, ECO:0000256|RuleBase:RU361187}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDB67927.1}.
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DR EMBL; CBEA010000073; CDB67927.1; -; Genomic_DNA.
DR AlphaFoldDB; R6L0S4; -.
DR Proteomes; UP000017970; Unassembled WGS sequence.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd18617; GH43_XynB-like; 1.
DR Gene3D; 2.60.120.200; -; 1.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR041542; GH43_C2.
DR InterPro; IPR006710; Glyco_hydro_43.
DR InterPro; IPR023296; Glyco_hydro_beta-prop_sf.
DR PANTHER; PTHR42812; BETA-XYLOSIDASE; 1.
DR PANTHER; PTHR42812:SF12; BETA-XYLOSIDASE-RELATED; 1.
DR Pfam; PF17851; GH43_C2; 1.
DR Pfam; PF04616; Glyco_hydro_43; 1.
DR SUPFAM; SSF75005; Arabinanase/levansucrase/invertase; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000256|ARBA:ARBA00023295, ECO:0000256|RuleBase:RU361187};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU361187}.
FT DOMAIN 330..519
FT /note="Beta-xylosidase C-terminal Concanavalin A-like"
FT /evidence="ECO:0000259|Pfam:PF17851"
FT ACT_SITE 14
FT /note="Proton acceptor"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-1"
FT ACT_SITE 174
FT /note="Proton donor"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-1"
FT SITE 120
FT /note="Important for catalytic activity, responsible for
FT pKa modulation of the active site Glu and correct
FT orientation of both the proton donor and substrate"
FT /evidence="ECO:0000256|PIRSR:PIRSR606710-2"
SQ SEQUENCE 539 AA; 60524 MW; 04D80ABBB43DD221 CRC64;
MLFKNPIIPG YNPDPSICRV GDDFYLVNST FEFFPGVPIY HSRNLVNWEL KGYCLDRRSQ
LELEGCRNSG GIYAPTIRFH NGMFYMITTN VTDKGNFVVH SDSVDGDWSE PAWIDQGGID
PSLFWDDDDK CYYCSTGILD GVRGIVAFEI NPMTGEILSD KKLISEGCGG QCAEGPHIYK
KDGMYYLMIA EGGTEYAHRE TIQRAENVWG PYTPCPHNPI ISHKEYKKSE IQATGHADLI
EDANGNWWLV FLGIRRFSHA LLHNLGRETF LAPVKWEDGW PVVGYNGNGT IELVMDAPLP
GLDYEESKAN IHTDDKTGKP MLYADHSVSI DFADEKLDKR LQFTRNPDMS HYIYDSADRK
LTLKGTDISL NEPGKSPTIL SFKQPEFTTT LKAVVDIGAT TAKRAGIAAY YNNDYHYEIY
IGNDDNGKYI GFYKHIHDMG AELIHIPVSK DEENMKLLVK IDTDREKYTF SYAIADTDNL
NARVAFRQAG SGLNAGLSTE GTRTMTFTGT LFSLFAEDGD GVFDTGVQLS INPDEDYKL
//