ID R6VVH8_9BACT Unreviewed; 333 AA.
AC R6VVH8;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=BN673_02257 {ECO:0000313|EMBL:CDC98449.1};
OS Prevotella sp. CAG:474.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Prevotellaceae;
OC Prevotella.
OX NCBI_TaxID=1262926 {ECO:0000313|EMBL:CDC98449.1, ECO:0000313|Proteomes:UP000018116};
RN [1] {ECO:0000313|EMBL:CDC98449.1, ECO:0000313|Proteomes:UP000018116}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:474 {ECO:0000313|Proteomes:UP000018116};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDC98449.1}.
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DR EMBL; CBGF010000041; CDC98449.1; -; Genomic_DNA.
DR AlphaFoldDB; R6VVH8; -.
DR STRING; 1262926.BN673_02257; -.
DR Proteomes; UP000018116; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.10.2910; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR43236; ANTITOXIN HIGA1; 1.
DR PANTHER; PTHR43236:SF1; BLL7220 PROTEIN; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000018116}.
FT DOMAIN 10..66
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 333 AA; 37365 MW; 991F5FBD959E5742 CRC64;
MKHNCFRIRL RAARLMSGLS MAQLADRCRI GLTRQSISRY EQGAMTPKPP LLHALAEALA
ISTDYLMGHG VEIDRPMLRT GIGSGMGDEA TEMISAQVAY WAEQYLAEEQ RTGIAHTFVN
EIAPVVVGTQ DEALKAAQLL RKSWRCGEGP LPHLLRLMER KGIKILDTPL PKDVYGLSTW
ADAIHPLIII DSRPEKTTVE RLRFTACHEL GHLILTIADG TEAAMTEKLC SKFASYFLFP
PDTYIEEVGA HRNNITLAEL ADLRGVYGTS IAAMVHQAYD LGIIGREHYD WWYDEMIKKN
PREEGWGQYD IAETIGRENR IKSISEKSIP STQ
//
