ID R6X0U1_9BACT Unreviewed; 615 AA.
AC R6X0U1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=Penicillin-binding protein 2 {ECO:0000313|EMBL:CDD17123.1};
GN ORFNames=BN655_00756 {ECO:0000313|EMBL:CDD17123.1};
OS Alistipes sp. CAG:435.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae;
OC Alistipes.
OX NCBI_TaxID=1262695 {ECO:0000313|EMBL:CDD17123.1, ECO:0000313|Proteomes:UP000017965};
RN [1] {ECO:0000313|EMBL:CDD17123.1, ECO:0000313|Proteomes:UP000017965}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:435 {ECO:0000313|Proteomes:UP000017965};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDD17123.1}.
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DR EMBL; CBGN010000050; CDD17123.1; -; Genomic_DNA.
DR AlphaFoldDB; R6X0U1; -.
DR STRING; 1262695.BN655_00756; -.
DR Proteomes; UP000017965; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR GO; GO:0009002; F:serine-type D-Ala-D-Ala carboxypeptidase activity; IEA:InterPro.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR InterPro; IPR017790; Penicillin-binding_protein_2.
DR NCBIfam; TIGR03423; pbp2_mrdA; 1.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR PANTHER; PTHR30627:SF2; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE MRDA; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 9..30
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 49..217
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 255..580
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
SQ SEQUENCE 615 AA; 68504 MW; 16FAE69C458AEE4F CRC64;
MKTEGRGKAL IIGLFVVAAI ILGKLFYIQI IDDEYKINSN NNSMVYDIIY PTRGIIYDRN
GKIIVSNKVT YDILVTPREV KQFDTLMLAD ALNVTPEFIR DKMNEYARNR RRIGYQSVVM
LKQIKPETYM QFAEIQYKFP GFRGQARSIR DYPVNAGGNL LGYVSEVDAN YIEKHSGEYR
PGDYAGKTGI EAAREKELRG EKGYHIYLRN SRNQIEQRYK DGEMDKEAVP GHDIHTTIDA
DLQQYGQELM RNKVGSLVAI EPKTGEILTL VSSPGVDVSM LANIGQHYDE IIKDPHKPMF
NRAVQAPYPP GSVFKLVNGL IGLQEGTLNT EITYPCSQGY HFGNRKLGCH VHKSPLALEE
AIMMSCNGYF CYVLRNILEN KKYHGIGEAL DKWNEYVQSF GFGHKLGTDF PAELGGTLPT
SKTYNKIYGK GGWKFTTIIS ISIGQGEVGA TPMQIANLAA TVANRGWYKI PHIVKASEGV
EIDPKYYERQ YTMVDTTNFK KVTQGMWRAV NSGFGSGGTA SIAAVPGLDI CGKTGTAQNP
RGADNSVFIC FAPKDNPKIA VAAYIENAGF GATWAAPIAS LLVEKYLNGE ISDQRRGLED
RVLQGNLMSR VKAYK
//