ID R7F590_9CLOT Unreviewed; 671 AA.
AC R7F590;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=Penicillin-binding protein 2 {ECO:0000313|EMBL:CDE09801.1};
GN ORFNames=BN623_01162 {ECO:0000313|EMBL:CDE09801.1};
OS Clostridium sp. CAG:354.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1262799 {ECO:0000313|EMBL:CDE09801.1, ECO:0000313|Proteomes:UP000018313};
RN [1] {ECO:0000313|EMBL:CDE09801.1, ECO:0000313|Proteomes:UP000018313}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:354 {ECO:0000313|Proteomes:UP000018313};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the transpeptidase family.
CC {ECO:0000256|ARBA:ARBA00007171}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDE09801.1}.
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DR EMBL; CBIG010000003; CDE09801.1; -; Genomic_DNA.
DR AlphaFoldDB; R7F590; -.
DR STRING; 1262799.BN623_01162; -.
DR Proteomes; UP000018313; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008658; F:penicillin binding; IEA:InterPro.
DR GO; GO:0046677; P:response to antibiotic; IEA:InterPro.
DR Gene3D; 3.40.710.10; DD-peptidase/beta-lactamase superfamily; 1.
DR Gene3D; 3.90.1310.10; Penicillin-binding protein 2a (Domain 2); 1.
DR InterPro; IPR012338; Beta-lactam/transpept-like.
DR InterPro; IPR007887; MecA_N.
DR InterPro; IPR032710; NTF2-like_dom_sf.
DR InterPro; IPR005311; PBP_dimer.
DR InterPro; IPR036138; PBP_dimer_sf.
DR InterPro; IPR001460; PCN-bd_Tpept.
DR PANTHER; PTHR30627:SF25; PENICILLIN-BINDING PROTEIN 3; 1.
DR PANTHER; PTHR30627; PEPTIDOGLYCAN D,D-TRANSPEPTIDASE; 1.
DR Pfam; PF05223; MecA_N; 1.
DR Pfam; PF03717; PBP_dimer; 1.
DR Pfam; PF00905; Transpeptidase; 1.
DR SUPFAM; SSF56601; beta-lactamase/transpeptidase-like; 1.
DR SUPFAM; SSF54427; NTF2-like; 1.
DR SUPFAM; SSF56519; Penicillin binding protein dimerisation domain; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000018313};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 32..146
FT /note="NTF2-like N-terminal transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF05223"
FT DOMAIN 153..321
FT /note="Penicillin-binding protein dimerisation"
FT /evidence="ECO:0000259|Pfam:PF03717"
FT DOMAIN 354..661
FT /note="Penicillin-binding protein transpeptidase"
FT /evidence="ECO:0000259|Pfam:PF00905"
SQ SEQUENCE 671 AA; 73854 MW; 4E5B920886508950 CRC64;
MKNKKVLIGT LIILVIVIVA IVAFFMLNKS EKPEDALNNY FSKIGEQKYE EAYDLISSSS
KDKTAKETFV NKNDSIYSGI DMTNLSTEIT NVEKADDGEK ITYTQKMNTS AGEVSFTNTV
TLVKEDKEYK LNWSNSMIFP ELGDNDKIRV KTLEAERGNI YDRNNVLLAG KGNISSIGLV
PGKMSANKDE DIQKLSTILG VSVDSINNKL NMSYVKDDTF VPIKNVATTE SQIKEQVLTI
PGVKITTESS RVYTLGREAS QLIGYVQAIS AEELESNAGK GYNSNSLIGK AGIEKAYEDT
LRGKDGKEIY IENEDGDKVK TIAKQELENG KDVKLTIDAT TQKQVYDSLE ENKGAYVAMD
SKTGEILALV STPSYDSNDF VLGMSTDEWN SLNQDENKPL LNRFTGTWSP GSTFKPVTGA
IGITEGKINP NEDFGRSGLS WQKDSSWGNY MVTTLTPYNE PANMQNALIR SDNIYFAKAA
LKIGYDAFME GLNKLGFNED ISFELSTSKS TYDTDGKIDD EVQLADSGYG QGQILVNPIH
MASIYSAFVN NGNMIKPTII YEENKQPEYL KENAISEEAA NTIKEDLIQV VENPNGTAHD
AKIDGLTIGA KTGTAELKKS KDEEGEVIGW FNAFTADETS AKQLVVVSMV EDANSVGGSH
YLFPKVTQIF K
//