ID R7JGV6_9BACT Unreviewed; 312 AA.
AC R7JGV6;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=NusB/RsmB/TIM44 domain-containing protein {ECO:0000259|Pfam:PF01029};
GN ORFNames=BN752_01704 {ECO:0000313|EMBL:CDE62986.1};
OS Alistipes putredinis CAG:67.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae;
OC Alistipes.
OX NCBI_TaxID=1263036 {ECO:0000313|EMBL:CDE62986.1, ECO:0000313|Proteomes:UP000018026};
RN [1] {ECO:0000313|EMBL:CDE62986.1, ECO:0000313|Proteomes:UP000018026}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MGS:67 {ECO:0000313|Proteomes:UP000018026};
RA Nielsen H.B., Almeida M., Juncker A.S., Rasmussen S., Li J., Sunagawa S.,
RA Plichta D., Gautier L., Le Chatelier E., Peletier E., Bonde I., Nielsen T.,
RA Manichanh C., Arumugam M., Batto J., Santos M.B.Q.D., Blom N., Borruel N.,
RA Burgdorf K.S., Boumezbeur F., Casellas F., Dore J., Guarner F., Hansen T.,
RA Hildebrand F., Kaas R.S., Kennedy S., Kristiansen K., Kultima J.R.,
RA Leonard P., Levenez F., Lund O., Moumen B., Le Paslier D., Pons N.,
RA Pedersen O., Prifti E., Qin J., Raes J., Tap J., Tims S., Ussery D.W.,
RA Yamada T., MetaHit consortium, Renault P., Sicheritz-Ponten T., Bork P.,
RA Wang J., Brunak S., Ehrlich S.D.;
RT "Dependencies among metagenomic species, viruses, plasmids and units of
RT genetic variation.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NusB family.
CC {ECO:0000256|ARBA:ARBA00005952}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDE62986.1}.
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DR EMBL; CBJI010000014; CDE62986.1; -; Genomic_DNA.
DR RefSeq; WP_004327833.1; NZ_FR900728.1.
DR AlphaFoldDB; R7JGV6; -.
DR GeneID; 73802364; -.
DR Proteomes; UP000018026; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:InterPro.
DR GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.940.10; NusB-like; 1.
DR InterPro; IPR035926; NusB-like_sf.
DR InterPro; IPR011605; NusB_fam.
DR InterPro; IPR006027; NusB_RsmB_TIM44.
DR PANTHER; PTHR11078:SF3; ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11078; N UTILIZATION SUBSTANCE PROTEIN B-RELATED; 1.
DR Pfam; PF01029; NusB; 1.
DR SUPFAM; SSF48013; NusB-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000018026};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription antitermination {ECO:0000256|ARBA:ARBA00022814};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 203..295
FT /note="NusB/RsmB/TIM44"
FT /evidence="ECO:0000259|Pfam:PF01029"
SQ SEQUENCE 312 AA; 36034 MW; 4008B44B9A2BA0D6 CRC64;
MLSRRQLRIK AIKALYAHLK SDSDNMIASE KNMMNSIDKT YDLYFQMMTL PVELAHYAQQ
RQELAKQKKL PTYEDLHPNT RFIDNAVIRM IADSDTVNDR MAARKLGWSK YPELIRTLYN
QLAATDYFQA YMSASESSFK ADAALLATFF EKELQDCPML DDVLEEQSIL WSDDLGFVLT
LVIRTISNMR QSHADVKMLP EFKSDEDAEF VKTLFEKTLI NYNERLEYIE KFTRNWDVER
IVFMDNLIMA TAITELVSFP SIPVKVTLDE YIDIAKFYST PGSSTFINGV LDKIVEALTE
EGKLKKTGRG LI
//
