ID R7QMM9_CHOCR Unreviewed; 379 AA.
AC R7QMM9;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=TPR repeat-containing protein {ECO:0000313|EMBL:CDF39772.1};
GN ORFNames=CHC_T00008297001 {ECO:0000313|EMBL:CDF39772.1};
OS Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).
OC Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gigartinales;
OC Gigartinaceae; Chondrus.
OX NCBI_TaxID=2769 {ECO:0000313|EMBL:CDF39772.1, ECO:0000313|Proteomes:UP000012073};
RN [1] {ECO:0000313|Proteomes:UP000012073}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Stackhouse {ECO:0000313|Proteomes:UP000012073};
RX PubMed=23503846; DOI=10.1073/pnas.1221259110;
RA Collen J., Porcel B., Carre W., Ball S.G., Chaparro C., Tonon T.,
RA Barbeyron T., Michel G., Noel B., Valentin K., Elias M., Artiguenave F.,
RA Arun A., Aury J.M., Barbosa-Neto J.F., Bothwell J.H., Bouget F.Y.,
RA Brillet L., Cabello-Hurtado F., Capella-Gutierrez S., Charrier B.,
RA Cladiere L., Cock J.M., Coelho S.M., Colleoni C., Czjzek M., Da Silva C.,
RA Delage L., Denoeud F., Deschamps P., Dittami S.M., Gabaldon T.,
RA Gachon C.M., Groisillier A., Herve C., Jabbari K., Katinka M., Kloareg B.,
RA Kowalczyk N., Labadie K., Leblanc C., Lopez P.J., McLachlan D.H.,
RA Meslet-Cladiere L., Moustafa A., Nehr Z., Nyvall Collen P., Panaud O.,
RA Partensky F., Poulain J., Rensing S.A., Rousvoal S., Samson G.,
RA Symeonidi A., Weissenbach J., Zambounis A., Wincker P., Boyen C.;
RT "Genome structure and metabolic features in the red seaweed Chondrus
RT crispus shed light on evolution of the Archaeplastida.";
RL Proc. Natl. Acad. Sci. U.S.A. 110:5247-5252(2013).
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DR EMBL; HG002071; CDF39772.1; -; Genomic_DNA.
DR RefSeq; XP_005710066.1; XM_005710009.1.
DR AlphaFoldDB; R7QMM9; -.
DR STRING; 2769.R7QMM9; -.
DR EnsemblPlants; CDF39772; CDF39772; CHC_T00008297001.
DR GeneID; 17317784; -.
DR Gramene; CDF39772; CDF39772; CHC_T00008297001.
DR KEGG; ccp:CHC_T00008297001; -.
DR OMA; NEVNPFW; -.
DR OrthoDB; 5490861at2759; -.
DR PhylomeDB; R7QMM9; -.
DR Proteomes; UP000012073; Unassembled WGS sequence.
DR GO; GO:0042802; F:identical protein binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR011717; TPR-4.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR44523; TETRATRICOPEPTIDE REPEAT PROTEIN 13; 1.
DR PANTHER; PTHR44523:SF1; TETRATRICOPEPTIDE REPEAT PROTEIN 13; 1.
DR Pfam; PF00515; TPR_1; 1.
DR Pfam; PF13432; TPR_16; 1.
DR Pfam; PF07721; TPR_4; 2.
DR SMART; SM00028; TPR; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000012073};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 181..214
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
SQ SEQUENCE 379 AA; 42068 MW; 4987329ABBE7FA99 CRC64;
MSSFIPGLTC VAPLYAFHVP CAVPTRLQLR GTHKDLGRTG HVLTKRRVKS FVARADVPLP
LASVASSTPL NAFNRISVGI AGVALAIALS NASTFSPHHH GDAHFVVASA FAETETATNF
SVSSLSVEER KALREESRRH TRAAGKVAQN FALARRQALA GDIPEALSTY DAITKSDPDF
APAYSNRGNI FAAQKKFDQA ITEYDRSLEL APLDNDSWVV FVNRGVTKLA RGDDPYIALA
DMNIANELRA GNDIILSNRA GVWEVMGKWD NAIRDYQAAL QSNDVQPFWE RYGLVLFQRN
KSYEALSILK RVATRFDVSD VHAAMAVIYF DRGDIAEAET QWSLVDRPRL FESKKFLVSE
RKWPPRAVEA MENFRKVKE
//