ID R7VMJ9_COLLI Unreviewed; 698 AA.
AC R7VMJ9;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Highly divergent homeobox {ECO:0000313|EMBL:PKK26782.1};
GN Name=HDX {ECO:0000313|EMBL:PKK26782.1};
GN ORFNames=A306_00007552 {ECO:0000313|EMBL:PKK26782.1};
OS Columba livia (Rock dove).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba.
OX NCBI_TaxID=8932 {ECO:0000313|EMBL:PKK26782.1, ECO:0000313|Proteomes:UP000053872};
RN [1] {ECO:0000313|EMBL:PKK26782.1, ECO:0000313|Proteomes:UP000053872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Blood {ECO:0000313|EMBL:PKK26782.1};
RX PubMed=23371554; DOI=10.1126/science.1230422;
RA Shapiro M.D., Kronenberg Z., Li C., Domyan E.T., Pan H., Campbell M.,
RA Tan H., Huff C.D., Hu H., Vickrey A.I., Nielsen S.C., Stringham S.A.,
RA Hu H., Willerslev E., Gilbert M.T., Yandell M., Zhang G., Wang J.;
RT "Genomic diversity and evolution of the head crest in the rock pigeon.";
RL Science 339:1063-1067(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PKK26782.1}.
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DR EMBL; AKCR02000023; PKK26782.1; -; Genomic_DNA.
DR RefSeq; XP_005514713.1; XM_005514656.1.
DR AlphaFoldDB; R7VMJ9; -.
DR STRING; 8932.R7VMJ9; -.
DR GeneID; 102089902; -.
DR KEGG; clv:102089902; -.
DR CTD; 139324; -.
DR eggNOG; ENOG502QPZG; Eukaryota.
DR InParanoid; R7VMJ9; -.
DR OrthoDB; 5398186at2759; -.
DR Proteomes; UP000053872; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd00086; homeodomain; 2.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR PANTHER; PTHR11636:SF80; HIGHLY DIVERGENT HOMEOBOX; 1.
DR PANTHER; PTHR11636; POU DOMAIN; 1.
DR SMART; SM00389; HOX; 2.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000313|EMBL:PKK26782.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000053872}.
FT DNA_BIND 443..506
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
SQ SEQUENCE 698 AA; 77504 MW; D82D0CF4E8D76570 CRC64;
MNLRSVFTVE QQRILQRYYE NGMTNQSKNC FQLILQCAQE TKLDFSVVRT WVGNKRRKMS
SKSAVESGGT PPGTVPTTPS VPPEAAVRNV VNIARSQSQQ SSWTSSNNDV IVTGIYSPAS
SSSRQGSTKQ TNVSMAEIHK TSIPRLPGKS DTEFQQQHHI PIGRQVPHCK NASLLVGEKT
IILSRQTSVL NSANSIYSHT KKSYGGSSVQ TAELVLPQKP MICHRPCKAE PVGCQRLQKT
EHAPLVSHVP PGQRANSRDP ACSTQNLEIR EVFSLAVTDQ PQRIVGGSAM QKRCSVEGSC
LSIAMETGDV DDEYAREEEL ASMGAQIQSY SRYCESSSSV RVENQSAALS GPGRNMSCSS
QMVNTRDVPD SILYHNRDYH LPARTSLHTT SSTLYNSGNP SRSTFSPHFT SSSQLRLSQN
QNNYQISGNL TVPWITGCSR KRALQDRTQF SDRDLATLKK YWDNGMTSLG SVCREKIEAV
AAELNVDCEI VRTWIGNRRR KYRLMGIEVP PPRGGPADFS DQSEFVSKSA LNPGEETATE
VGDDNDRNDE VSICLSEGSS QEETNESLQN EEIGHKDDDQ NPVSTDNVKI EIIDDEESDM
ISNSEVDQMS SLLDYKNEEV RFIENELENH KQKYFELQTF TRSLILAIKS DDKEQQQALL
SDLPPELEEM DFNHASPEPD DTSFSLSSLS EKNASDSL
//
