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Database: UniProt
Entry: R8Y3S2_ACICA
LinkDB: R8Y3S2_ACICA
Original site: R8Y3S2_ACICA 
ID   R8Y3S2_ACICA            Unreviewed;      1216 AA.
AC   R8Y3S2;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   RecName: Full=SSD domain-containing protein {ECO:0000259|PROSITE:PS50156};
GN   ORFNames=F935_02955 {ECO:0000313|EMBL:EOQ62167.1};
OS   Acinetobacter calcoaceticus ANC 3811.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae;
OC   Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.
OX   NCBI_TaxID=1217690 {ECO:0000313|EMBL:EOQ62167.1, ECO:0000313|Proteomes:UP000014041};
RN   [1] {ECO:0000313|EMBL:EOQ62167.1, ECO:0000313|Proteomes:UP000014041}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ANC 3811 {ECO:0000313|EMBL:EOQ62167.1,
RC   ECO:0000313|Proteomes:UP000014041};
RG   The Broad Institute Genome Sequencing Platform;
RG   The Broad Institute Genome Sequencing Center for Infectious Disease;
RA   Cerqueira G., Feldgarden M., Courvalin P., Perichon B.,
RA   Grillot-Courvalin C., Clermont D., Rocha E., Yoon E.-J., Nemec A.,
RA   Walker B., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA   Abouelleil A., Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B.,
RA   Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C.,
RA   Imamovic A., Larimer J., McCowan C., Murphy C., Neiman D., Pearson M.,
RA   Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J.,
RA   Nusbaum C., Birren B.;
RT   "The Genome Sequence of Acinetobacter sp. ANC 3811.";
RL   Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EOQ62167.1}.
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DR   EMBL; APQJ01000011; EOQ62167.1; -; Genomic_DNA.
DR   RefSeq; WP_016139605.1; NZ_KB976986.1.
DR   AlphaFoldDB; R8Y3S2; -.
DR   PATRIC; fig|1217690.3.peg.2922; -.
DR   HOGENOM; CLU_008861_0_0_6; -.
DR   Proteomes; UP000014041; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   CDD; cd16329; LolA_like; 1.
DR   Gene3D; 3.30.530.20; -; 1.
DR   Gene3D; 2.50.20.10; Lipoprotein localisation LolA/LolB/LppX; 1.
DR   Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR   InterPro; IPR004869; MMPL_dom.
DR   InterPro; IPR019587; Polyketide_cyclase/dehydratase.
DR   InterPro; IPR033399; Put_LolA-like.
DR   InterPro; IPR000731; SSD.
DR   InterPro; IPR023393; START-like_dom_sf.
DR   PANTHER; PTHR33406; MEMBRANE PROTEIN MJ1562-RELATED; 1.
DR   PANTHER; PTHR33406:SF2; MEMBRANE PROTEIN YDFJ; 1.
DR   Pfam; PF17131; LolA_like; 1.
DR   Pfam; PF03176; MMPL; 2.
DR   Pfam; PF10604; Polyketide_cyc2; 1.
DR   SUPFAM; SSF55961; Bet v1-like; 1.
DR   SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR   PROSITE; PS50156; SSD; 1.
PE   4: Predicted;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        184..207
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        388..405
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        412..432
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        438..459
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        494..514
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        520..542
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        582..602
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        809..829
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        835..857
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        878..899
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        911..937
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        949..970
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          415..545
FT                   /note="SSD"
FT                   /evidence="ECO:0000259|PROSITE:PS50156"
SQ   SEQUENCE   1216 AA;  134476 MW;  5C392F15C1B4DCF9 CRC64;
     MVTIEHAFLI PAEIDKVFNY LANPANDAGW QLSCKHSELL DNTPRVGSKY EIGFSFIGRE
     MSFKGEITHL VPNELYAFKV VEGPFLYTGT YRFKPHPEGT WIEWVFEAEP GSFFGVLPPA
     LLKKMVLAQF KKDVANLEAL AQKGEAYESA GKDGKQTHET TKPLRKTHQV MEQYSRWILK
     HRRIVLTVVM LLTIALAYLA SGVKIIIDPD ALAPKGHPYI TSTKLIEKKF GSKYMVVIGI
     TPKQGDIYQP QVLEKVKRIT EEVDNAPGVV RSTLMSLAAR QAKGITANSD GFDAKKLLPN
     SSVTESDVDQ LKKLLALNPI YMNSVVSKDQ KTAAILLELE ESPEGFQKMM GPINKIVAAE
     QSKDMTISVG GNPVYLDKAE DYSKRINILF PIAILVIGLL HFEAFRSKQG LILPLVTALL
     AVAWGMGMMG LFKQPMDIFN SPTPILILAI AAGHAVQLLK RYYEDFDRLI AQGMEPKAAN
     SEAVVQSMVR VGPVMILAGG IAAAGFFSLL TFNIPTIRSF GIFTGIGIIS TLIIEMTFIP
     VLRSMLPPPS VTKVARKGLP IWDWIPKRIG DVILSVRPRM MLMTAIAVLG VFLALGTSRI
     VVDNDSRNFF SRDLPMQQDD RFLNQSLGGT NSLYIMVDTK VRDGIENPDI LKAIDNTEKF
     ANSIPEVGKT ISIVDYIKRM NQAMNADQPQ AFQVPATKDV VAQYLLLYSM SGEPTDFESY
     IDTTQRYAKI TILLKTGSNH RIKEILESLK TYMAGQLGDK AVVSFGGDVT QTIALTETMV
     HGKLMNILQI SFAVFFISAL VFRSFSAGLI VLTPLLFSIL AIFGVMGWLD IPLNIPNSLI
     SAMAVGIGAD YAIYFLYRLR EILSEEGGDI KDAIRKTLST AGKASLFVAT AVAGGYGVLS
     LSQGFHVHQW LAMFIVIAML FSVFATLIMV PTMILILKPR FIFPSNKKSI TVAQTVVTSL
     LLGTALTMSM PKTSYADEVQ DIVNRSDDAS KFLSSSASAK FVLTSKSGEQ RVRLTKNMTK
     LAGNTQNNMR LTEFISPADV QGTTTLLIEN SKGSDSMFVY LPALKKVRRL ASANKGDAFI
     GTDFSYGDVL GYKLSDWKYT KLADGKFNGK DCYMIEATPI NNTVKSDFGY SKRRMCIMKD
     NFVTATIDIW DTAGKPLKHI EFTDIRPYGK VKPRWQAMKS MAKNLQTQHM TQVIVSDFVA
     EKTLSDKIFS PQSLEK
//
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