ID R8Y3S2_ACICA Unreviewed; 1216 AA.
AC R8Y3S2;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=SSD domain-containing protein {ECO:0000259|PROSITE:PS50156};
GN ORFNames=F935_02955 {ECO:0000313|EMBL:EOQ62167.1};
OS Acinetobacter calcoaceticus ANC 3811.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Moraxellales; Moraxellaceae;
OC Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.
OX NCBI_TaxID=1217690 {ECO:0000313|EMBL:EOQ62167.1, ECO:0000313|Proteomes:UP000014041};
RN [1] {ECO:0000313|EMBL:EOQ62167.1, ECO:0000313|Proteomes:UP000014041}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ANC 3811 {ECO:0000313|EMBL:EOQ62167.1,
RC ECO:0000313|Proteomes:UP000014041};
RG The Broad Institute Genome Sequencing Platform;
RG The Broad Institute Genome Sequencing Center for Infectious Disease;
RA Cerqueira G., Feldgarden M., Courvalin P., Perichon B.,
RA Grillot-Courvalin C., Clermont D., Rocha E., Yoon E.-J., Nemec A.,
RA Walker B., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B.,
RA Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C.,
RA Imamovic A., Larimer J., McCowan C., Murphy C., Neiman D., Pearson M.,
RA Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J.,
RA Nusbaum C., Birren B.;
RT "The Genome Sequence of Acinetobacter sp. ANC 3811.";
RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EOQ62167.1}.
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DR EMBL; APQJ01000011; EOQ62167.1; -; Genomic_DNA.
DR RefSeq; WP_016139605.1; NZ_KB976986.1.
DR AlphaFoldDB; R8Y3S2; -.
DR PATRIC; fig|1217690.3.peg.2922; -.
DR HOGENOM; CLU_008861_0_0_6; -.
DR Proteomes; UP000014041; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd16329; LolA_like; 1.
DR Gene3D; 3.30.530.20; -; 1.
DR Gene3D; 2.50.20.10; Lipoprotein localisation LolA/LolB/LppX; 1.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR InterPro; IPR004869; MMPL_dom.
DR InterPro; IPR019587; Polyketide_cyclase/dehydratase.
DR InterPro; IPR033399; Put_LolA-like.
DR InterPro; IPR000731; SSD.
DR InterPro; IPR023393; START-like_dom_sf.
DR PANTHER; PTHR33406; MEMBRANE PROTEIN MJ1562-RELATED; 1.
DR PANTHER; PTHR33406:SF2; MEMBRANE PROTEIN YDFJ; 1.
DR Pfam; PF17131; LolA_like; 1.
DR Pfam; PF03176; MMPL; 2.
DR Pfam; PF10604; Polyketide_cyc2; 1.
DR SUPFAM; SSF55961; Bet v1-like; 1.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 184..207
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 388..405
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 412..432
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 438..459
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 494..514
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 520..542
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 582..602
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 809..829
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 835..857
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 878..899
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 911..937
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 949..970
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 415..545
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
SQ SEQUENCE 1216 AA; 134476 MW; 5C392F15C1B4DCF9 CRC64;
MVTIEHAFLI PAEIDKVFNY LANPANDAGW QLSCKHSELL DNTPRVGSKY EIGFSFIGRE
MSFKGEITHL VPNELYAFKV VEGPFLYTGT YRFKPHPEGT WIEWVFEAEP GSFFGVLPPA
LLKKMVLAQF KKDVANLEAL AQKGEAYESA GKDGKQTHET TKPLRKTHQV MEQYSRWILK
HRRIVLTVVM LLTIALAYLA SGVKIIIDPD ALAPKGHPYI TSTKLIEKKF GSKYMVVIGI
TPKQGDIYQP QVLEKVKRIT EEVDNAPGVV RSTLMSLAAR QAKGITANSD GFDAKKLLPN
SSVTESDVDQ LKKLLALNPI YMNSVVSKDQ KTAAILLELE ESPEGFQKMM GPINKIVAAE
QSKDMTISVG GNPVYLDKAE DYSKRINILF PIAILVIGLL HFEAFRSKQG LILPLVTALL
AVAWGMGMMG LFKQPMDIFN SPTPILILAI AAGHAVQLLK RYYEDFDRLI AQGMEPKAAN
SEAVVQSMVR VGPVMILAGG IAAAGFFSLL TFNIPTIRSF GIFTGIGIIS TLIIEMTFIP
VLRSMLPPPS VTKVARKGLP IWDWIPKRIG DVILSVRPRM MLMTAIAVLG VFLALGTSRI
VVDNDSRNFF SRDLPMQQDD RFLNQSLGGT NSLYIMVDTK VRDGIENPDI LKAIDNTEKF
ANSIPEVGKT ISIVDYIKRM NQAMNADQPQ AFQVPATKDV VAQYLLLYSM SGEPTDFESY
IDTTQRYAKI TILLKTGSNH RIKEILESLK TYMAGQLGDK AVVSFGGDVT QTIALTETMV
HGKLMNILQI SFAVFFISAL VFRSFSAGLI VLTPLLFSIL AIFGVMGWLD IPLNIPNSLI
SAMAVGIGAD YAIYFLYRLR EILSEEGGDI KDAIRKTLST AGKASLFVAT AVAGGYGVLS
LSQGFHVHQW LAMFIVIAML FSVFATLIMV PTMILILKPR FIFPSNKKSI TVAQTVVTSL
LLGTALTMSM PKTSYADEVQ DIVNRSDDAS KFLSSSASAK FVLTSKSGEQ RVRLTKNMTK
LAGNTQNNMR LTEFISPADV QGTTTLLIEN SKGSDSMFVY LPALKKVRRL ASANKGDAFI
GTDFSYGDVL GYKLSDWKYT KLADGKFNGK DCYMIEATPI NNTVKSDFGY SKRRMCIMKD
NFVTATIDIW DTAGKPLKHI EFTDIRPYGK VKPRWQAMKS MAKNLQTQHM TQVIVSDFVA
EKTLSDKIFS PQSLEK
//