ID R9AM93_WALI9 Unreviewed; 893 AA.
AC R9AM93;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 08-NOV-2023, entry version 47.
DE RecName: Full=mevalonate kinase {ECO:0000256|ARBA:ARBA00012103};
DE EC=2.7.1.36 {ECO:0000256|ARBA:ARBA00012103};
GN ORFNames=J056_004542 {ECO:0000313|EMBL:EOR01221.1};
OS Wallemia ichthyophaga (strain EXF-994 / CBS 113033).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Wallemiomycotina;
OC Wallemiomycetes; Wallemiales; Wallemiaceae; Wallemia.
OX NCBI_TaxID=1299270 {ECO:0000313|EMBL:EOR01221.1, ECO:0000313|Proteomes:UP000014064};
RN [1] {ECO:0000313|Proteomes:UP000014064}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EXF-994 / CBS 113033 {ECO:0000313|Proteomes:UP000014064};
RX PubMed=24034603; DOI=10.1186/1471-2164-14-617;
RA Zajc J., Liu Y., Dai W., Yang Z., Hu J., Gostincar C., Gunde-Cimerman N.;
RT "Genome and transcriptome sequencing of the halophilic fungus Wallemia
RT ichthyophaga: haloadaptations present and absent.";
RL BMC Genomics 14:617-617(2013).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(R)-mevalonate + ATP = (R)-5-phosphomevalonate + ADP + H(+);
CC Xref=Rhea:RHEA:17065, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:36464, ChEBI:CHEBI:58146, ChEBI:CHEBI:456216;
CC EC=2.7.1.36; Evidence={ECO:0000256|ARBA:ARBA00029310};
CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:17066;
CC Evidence={ECO:0000256|ARBA:ARBA00029310};
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- PATHWAY: Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis
CC via mevalonate pathway; isopentenyl diphosphate from (R)-mevalonate:
CC step 1/3. {ECO:0000256|ARBA:ARBA00029438}.
CC -!- SIMILARITY: Belongs to the GHMP kinase family. Mevalonate kinase
CC subfamily. {ECO:0000256|ARBA:ARBA00006495}.
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DR EMBL; KE007231; EOR01221.1; -; Genomic_DNA.
DR RefSeq; XP_009268012.1; XM_009269737.1.
DR AlphaFoldDB; R9AM93; -.
DR STRING; 1299270.R9AM93; -.
DR GeneID; 20377494; -.
DR KEGG; wic:J056_004542; -.
DR eggNOG; KOG0053; Eukaryota.
DR eggNOG; KOG1511; Eukaryota.
DR HOGENOM; CLU_009484_1_0_1; -.
DR OMA; QPYRFST; -.
DR OrthoDB; 6018at2759; -.
DR UniPathway; UPA00057; UER00098.
DR Proteomes; UP000014064; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004121; F:cystathionine beta-lyase activity; IEA:InterPro.
DR GO; GO:0004496; F:mevalonate kinase activity; IEA:UniProtKB-EC.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0071266; P:'de novo' L-methionine biosynthetic process; IEA:InterPro.
DR GO; GO:0019287; P:isopentenyl diphosphate biosynthetic process, mevalonate pathway; IEA:UniProtKB-UniPathway.
DR GO; GO:0016310; P:phosphorylation; IEA:UniProtKB-KW.
DR GO; GO:0019346; P:transsulfuration; IEA:InterPro.
DR CDD; cd00614; CGS_like; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 3.30.70.890; GHMP kinase, C-terminal domain; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR000277; Cys/Met-Metab_PyrdxlP-dep_enz.
DR InterPro; IPR006238; Cys_b_lyase_euk.
DR InterPro; IPR013750; GHMP_kinase_C_dom.
DR InterPro; IPR036554; GHMP_kinase_C_sf.
DR InterPro; IPR006204; GHMP_kinase_N_dom.
DR InterPro; IPR006203; GHMP_knse_ATP-bd_CS.
DR InterPro; IPR006205; Mev_gal_kin.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR NCBIfam; TIGR01329; cysta_beta_ly_E; 1.
DR NCBIfam; TIGR00549; mevalon_kin; 1.
DR PANTHER; PTHR11808:SF50; CYSTATHIONINE BETA-LYASE; 1.
DR PANTHER; PTHR11808; TRANS-SULFURATION ENZYME FAMILY MEMBER; 1.
DR Pfam; PF01053; Cys_Met_Meta_PP; 1.
DR Pfam; PF08544; GHMP_kinases_C; 1.
DR Pfam; PF00288; GHMP_kinases_N; 1.
DR PRINTS; PR00959; MEVGALKINASE.
DR SUPFAM; SSF55060; GHMP Kinase, C-terminal domain; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR PROSITE; PS00868; CYS_MET_METAB_PP; 1.
DR PROSITE; PS00627; GHMP_KINASES_ATP; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Kinase {ECO:0000256|ARBA:ARBA00022777};
KW Lipid biosynthesis {ECO:0000256|ARBA:ARBA00022516};
KW Lipid metabolism {ECO:0000256|ARBA:ARBA00023098};
KW Lyase {ECO:0000313|EMBL:EOR01221.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898};
KW Reference proteome {ECO:0000313|Proteomes:UP000014064};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 579..665
FT /note="GHMP kinase N-terminal"
FT /evidence="ECO:0000259|Pfam:PF00288"
FT DOMAIN 748..801
FT /note="GHMP kinase C-terminal"
FT /evidence="ECO:0000259|Pfam:PF08544"
SQ SEQUENCE 893 AA; 95748 MW; AD8257B62C670965 CRC64;
MTDGSSKGPD KYNFSTECVT IDNPDAGKDQ FNSSSVPIYQ SATFKGMNGE YDYSRSGNPT
RTHLQHHLAK ISSAKHAFAV SSGMAALDVI ARILKPGDHV VAGDDLYGGS NRLLGYLQSN
AGVVVHHIDT CTPSTVEQYL DKERTRLVLL ETPTNPLIKI CDVQEIASRV KAVCPSAIIV
VDNTMMSPYL QRPLNFGADV VYDSATKYLS GHHDLMAGVV ICNRDDLAKH MSFTINSVGN
GLGPFDSFLL LRGLKTLAIR MDRQQASAKI IASFLNQLQF QVHYPGLKNH PGHHTHFKMA
KDAGAVLSFE TRDIKTSERI VGAAKLWGIS VSFGAVNSLI SMPCLMSHAS IPAHLRAERG
LPEDLIRLCV GIEDWEDLID DLECSLVQAG AIRRREEQST SSTLSSPEGS LERVGEERAL
GWQRCLPSDA NNASMDGALQ QPHTSGDAEN IVVSAPGKVI LFGEHAVVHG VTAIASALDL
RCYGCLGARS DDTIHLVLPD LHSEYSTKVS ALPWAETEVE KSDASDGDGN DVDMNPTLIA
AIEKTLPPSI TGKIRGAVVA FVHHYMSLCY PTKPSLTFTA RSSIPIGAGL GSSAAYSTCV
SAALLLYMQK VVINRQRATP HISHSGRKYI GVDIAATVNK WAFASERILH GTPSGIDNSV
SVFGGAISYA RGRAQPMIPL QGFQSMLLLL ANTHVERDAK AVISRVHALK ANQPGLFDEC
MRRIQDVVDE AVRCFQDTDL PRESMLVGLG KLVAANHAQL ELLGVSHPAL EMIIAKLKAY
GLQTKLTGAG GGGCTVTLLP DSFGAGGESG KSGESAHTLA HVTSNLAQNG FSSIVTTVGG
SGLGVLIDKK VWDMRLVDQD ARESVAPLAG IFTQSSAEEL AGKMKECGHW VFV
//