ID R9K3X2_9FIRM Unreviewed; 570 AA.
AC R9K3X2;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=PAS domain S-box protein {ECO:0000313|EMBL:EOS41119.1};
GN ORFNames=C808_00288 {ECO:0000313|EMBL:EOS41119.1};
OS Lachnospiraceae bacterium M18-1.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=1235792 {ECO:0000313|EMBL:EOS41119.1, ECO:0000313|Proteomes:UP000014090};
RN [1] {ECO:0000313|EMBL:EOS41119.1, ECO:0000313|Proteomes:UP000014090}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M18-1 {ECO:0000313|EMBL:EOS41119.1,
RC ECO:0000313|Proteomes:UP000014090};
RG The Broad Institute Genomics Platform;
RG The Broad Institute Genome Sequencing Center for Infectious Disease;
RA Earl A., Xavier R., Elson C., Duck W., Walker B., Young S., Zeng Q.,
RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Lachnospiraceae bacterium M18-1.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EOS41119.1}.
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DR EMBL; ASSV01000003; EOS41119.1; -; Genomic_DNA.
DR AlphaFoldDB; R9K3X2; -.
DR STRING; 1235792.C808_00288; -.
DR PATRIC; fig|1235792.3.peg.310; -.
DR eggNOG; COG2221; Bacteria.
DR eggNOG; COG3290; Bacteria.
DR eggNOG; COG4624; Bacteria.
DR HOGENOM; CLU_027268_0_0_9; -.
DR OrthoDB; 9798098at2; -.
DR Proteomes; UP000014090; Unassembled WGS sequence.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.20; -; 1.
DR Gene3D; 1.10.15.40; Electron transport complex subunit B, putative Fe-S cluster; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR007202; 4Fe-4S_dom.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR InterPro; IPR009016; Fe_hydrogenase.
DR InterPro; IPR004108; Fe_hydrogenase_lsu_C.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR11615:SF368; HYDROGENASE-RELATED; 1.
DR PANTHER; PTHR11615; NITRATE, FORMATE, IRON DEHYDROGENASE; 1.
DR Pfam; PF02906; Fe_hyd_lg_C; 1.
DR Pfam; PF13237; Fer4_10; 1.
DR Pfam; PF04060; FeS; 1.
DR Pfam; PF00989; PAS; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR SUPFAM; SSF53920; Fe-only hydrogenase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS51656; 4FE4S; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 2.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000014090}.
FT DOMAIN 1..30
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 31..60
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 355..416
FT /note="4Fe-4S"
FT /evidence="ECO:0000259|PROSITE:PS51656"
FT DOMAIN 407..477
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
SQ SEQUENCE 570 AA; 64633 MW; 56F1598CFDCBD85E CRC64;
MKVIDFKDAK CRHCYKCVRH CQVKAITVQQ EQARILTDHC INCGRCMEIC PQNAKTFASD
MDRVKGFLRQ GLKTVISIAP SYIGVLDFDR PGQVVDALLK LGFTEVRETA EGAAMVTGEY
QRLIRENQMP NIITTCCPSV NDLIEKYYPE CAPLMAPVVS PMVAHGRYIK KLYGEDVKVV
FLGPCIAKKQ EAIGDERVTG AIDAILTFEE LAIWLDEAKI SIYDCQDRPM GNPDPEINRM
YPISGGVVQS VIAEEEMDRY HKVFVDGLGN CMEMLECLKR GELEHCFIEA NVCEGGCTKG
PASARWNTSY VKAKIKIEKE VSHKAARNLP EMSAEELHKT FEDRSIRESY PTEEEIQEIL
RSVGKYTKED ELNCGACGYS TCREKAVAVF QNKAELSMCM PYALMQAESM SNVVMDVTPN
MIFIIDNELR IRECNKKGQE LLGVGKEEAL QRYIFEFMDA ADIEETLRTK ESVFHKKLQL
EHGRITVEET IVYIENLESV LVTFQDVTRE EKMKEQHYNL KVETMEMAQK VIDKQMMVAQ
EIAGLLGETT AETKVTLTRL RDSILNEEDA
//
