ID R9M8N1_9FIRM Unreviewed; 497 AA.
AC R9M8N1;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=DNA polymerase V {ECO:0000313|EMBL:EOS67409.1};
GN ORFNames=C816_00442 {ECO:0000313|EMBL:EOS67409.1};
OS Oscillibacter sp. 1-3.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC Oscillibacter.
OX NCBI_TaxID=1235797 {ECO:0000313|EMBL:EOS67409.1, ECO:0000313|Proteomes:UP000014108};
RN [1] {ECO:0000313|EMBL:EOS67409.1, ECO:0000313|Proteomes:UP000014108}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1-3 {ECO:0000313|EMBL:EOS67409.1,
RC ECO:0000313|Proteomes:UP000014108};
RG The Broad Institute Genomics Platform;
RG The Broad Institute Genome Sequencing Center for Infectious Disease;
RA Earl A., Xavier R., Elson C., Duck W., Walker B., Young S., Zeng Q.,
RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Oscillibacter bacterium 1-3.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DNA polymerase type-Y family.
CC {ECO:0000256|ARBA:ARBA00010945}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EOS67409.1}.
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DR EMBL; ASTC01000002; EOS67409.1; -; Genomic_DNA.
DR RefSeq; WP_016320778.1; NZ_KE159703.1.
DR AlphaFoldDB; R9M8N1; -.
DR STRING; 1235797.C816_00442; -.
DR PATRIC; fig|1235797.3.peg.494; -.
DR eggNOG; COG0389; Bacteria.
DR HOGENOM; CLU_012348_5_1_9; -.
DR OrthoDB; 9808813at2; -.
DR Proteomes; UP000014108; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0009432; P:SOS response; IEA:UniProt.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR017961; DNA_pol_Y-fam_little_finger.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001126; UmuC.
DR PANTHER; PTHR11076; DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; 1.
DR PANTHER; PTHR11076:SF35; DNA REPAIR PROTEIN HOMOLOG YOBH; 1.
DR Pfam; PF00817; IMS; 1.
DR Pfam; PF11799; IMS_C; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50173; UMUC; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Reference proteome {ECO:0000313|Proteomes:UP000014108}.
FT DOMAIN 6..234
FT /note="UmuC"
FT /evidence="ECO:0000259|PROSITE:PS50173"
SQ SEQUENCE 497 AA; 56183 MW; C01633FA2968A003 CRC64;
MKERTYLAID LKSFYASVEC VERGLDPLTT NLVVADLSRT EKTICLAVTP SLKAWGISGR
ARLFEVVQRV KEVNAQRLRS APGRKFSGAS FSDTELKADP GLAVDYIVAP PRMAHYMEWS
TRVYNVYLKY IAPEDIHNYS IDEVLMDVTN YLDTYKCNAR QLAMRIILDV LETTGITATA
GIGTNLYLCK VAMDIVAKHI HPDVNGVRIA KLDERTYRRL LWDHRPLTDF WRVGGGYTRK
LEAHGIYTMG DIARCSLTDE DLLYRLFGVN AELLIDHAWG WEPCTMADIK AYKPESRSVG
SGQVLQCPYS YDKARLVVRE MADQLALDLV DKGLVTDQLV LTVGYDIENL KGRTYQGEVT
KDRYGRSIPK HAHGTANLEE YTASTRRIIT AALELFDRII DRKLLVRRLY LTAARVTDEE
SAPGKKAVEQ LDLFTDYAAK QEREAQETAD LEREKKVQRT LLDIKKKYGK NAILKGMNLK
EGATAKSRNE QIGGHKA
//
