ID R9MJM4_9FIRM Unreviewed; 117 AA.
AC R9MJM4;
DT 24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT 24-JUL-2013, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Putative HNH nuclease YajD {ECO:0000256|ARBA:ARBA00040194};
GN ORFNames=C818_01031 {ECO:0000313|EMBL:EOS71023.1};
OS Lachnospiraceae bacterium MD308.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae.
OX NCBI_TaxID=1235799 {ECO:0000313|EMBL:EOS71023.1, ECO:0000313|Proteomes:UP000014117};
RN [1] {ECO:0000313|EMBL:EOS71023.1, ECO:0000313|Proteomes:UP000014117}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=3-2 {ECO:0000313|EMBL:EOS71023.1,
RC ECO:0000313|Proteomes:UP000014117};
RG The Broad Institute Genomics Platform;
RG The Broad Institute Genome Sequencing Center for Infectious Disease;
RA Earl A., Xavier R., Elson C., Duck W., Walker B., Young S., Zeng Q.,
RA Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Allen A.W., Alvarado L.,
RA Arachchi H.M., Berlin A.M., Chapman S.B., Gainer-Dewar J., Goldberg J.,
RA Griggs A., Gujja S., Hansen M., Howarth C., Imamovic A., Ireland A.,
RA Larimer J., McCowan C., Murphy C., Pearson M., Poon T.W., Priest M.,
RA Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Lachnospiraceae bacterium 3-2.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the HNH nuclease family.
CC {ECO:0000256|ARBA:ARBA00038412}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EOS71023.1}.
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DR EMBL; ASTE01000011; EOS71023.1; -; Genomic_DNA.
DR AlphaFoldDB; R9MJM4; -.
DR STRING; 1235799.C818_01031; -.
DR PATRIC; fig|1235799.3.peg.1100; -.
DR eggNOG; COG1403; Bacteria.
DR HOGENOM; CLU_108879_4_2_9; -.
DR OrthoDB; 9779761at2; -.
DR Proteomes; UP000014117; Unassembled WGS sequence.
DR GO; GO:0004519; F:endonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00085; HNHc; 1.
DR Gene3D; 1.10.30.50; -; 1.
DR InterPro; IPR002711; HNH.
DR InterPro; IPR003615; HNH_nuc.
DR PANTHER; PTHR41286; HNH NUCLEASE YAJD-RELATED; 1.
DR PANTHER; PTHR41286:SF1; HNH NUCLEASE YAJD-RELATED; 1.
DR Pfam; PF01844; HNH; 1.
DR SMART; SM00507; HNHc; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000014117}.
FT DOMAIN 53..106
FT /note="HNH nuclease"
FT /evidence="ECO:0000259|SMART:SM00507"
SQ SEQUENCE 117 AA; 13933 MW; 82ABFD9EAF522001 CRC64;
MPRKPKRPCS YPGCPELTDG RFCEEHTKLM NRRYEKYGRD PAVRRRYGRA WKRIRDSYVK
THPFCEQCYE KGILVPVEEV HHKKPLSEGG THDRSNLISL CKSCHSRIHA QRGDRWH
//
