GenomeNet

Database: UniProt
Entry: RTKN2_MOUSE
LinkDB: RTKN2_MOUSE
Original site: RTKN2_MOUSE 
ID   RTKN2_MOUSE             Reviewed;         604 AA.
AC   Q14B46; Q8BFP3; Q8BFP8; Q8BFQ0;
DT   13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT   13-NOV-2007, sequence version 2.
DT   24-JAN-2024, entry version 110.
DE   RecName: Full=Rhotekin-2;
DE   AltName: Full=Pleckstrin homology domain-containing family K member 1;
DE            Short=PH domain-containing family K member 1;
GN   Name=Rtkn2; Synonyms=Plekhk1;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), AND NUCLEOTIDE SEQUENCE
RP   [LARGE SCALE MRNA] OF 1-439 (ISOFORM 1).
RC   STRAIN=C57BL/6J; TISSUE=Embryo, Kidney, and Thymus;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [3]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Lung;
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL   Cell 143:1174-1189(2010).
CC   -!- FUNCTION: May play an important role in lymphopoiesis. {ECO:0000250}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q14B46-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q14B46-2; Sequence=VSP_029140;
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AK030986; BAC27204.1; -; mRNA.
DR   EMBL; AK045134; BAC32237.1; -; mRNA.
DR   EMBL; AK052662; BAC35087.1; -; mRNA.
DR   EMBL; BC116341; AAI16342.1; -; mRNA.
DR   EMBL; BC116342; AAI16343.1; -; mRNA.
DR   CCDS; CCDS88017.1; -. [Q14B46-2]
DR   CCDS; CCDS88018.1; -. [Q14B46-1]
DR   RefSeq; XP_006513353.1; XM_006513290.2.
DR   RefSeq; XP_006513354.1; XM_006513291.1.
DR   AlphaFoldDB; Q14B46; -.
DR   SMR; Q14B46; -.
DR   BioGRID; 228447; 3.
DR   STRING; 10090.ENSMUSP00000112946; -.
DR   iPTMnet; Q14B46; -.
DR   PhosphoSitePlus; Q14B46; -.
DR   jPOST; Q14B46; -.
DR   MaxQB; Q14B46; -.
DR   PaxDb; 10090-ENSMUSP00000112946; -.
DR   ProteomicsDB; 257051; -. [Q14B46-1]
DR   ProteomicsDB; 257052; -. [Q14B46-2]
DR   Antibodypedia; 28261; 152 antibodies from 25 providers.
DR   Ensembl; ENSMUST00000068994.14; ENSMUSP00000070717.8; ENSMUSG00000037846.19. [Q14B46-1]
DR   Ensembl; ENSMUST00000117086.2; ENSMUSP00000112419.2; ENSMUSG00000037846.19. [Q14B46-2]
DR   Ensembl; ENSMUST00000118160.8; ENSMUSP00000112946.2; ENSMUSG00000037846.19. [Q14B46-1]
DR   Ensembl; ENSMUST00000147556.8; ENSMUSP00000116166.2; ENSMUSG00000037846.19. [Q14B46-2]
DR   UCSC; uc011xfq.1; mouse. [Q14B46-1]
DR   AGR; MGI:2158417; -.
DR   MGI; MGI:2158417; Rtkn2.
DR   VEuPathDB; HostDB:ENSMUSG00000037846; -.
DR   eggNOG; ENOG502QRWR; Eukaryota.
DR   GeneTree; ENSGT00940000157470; -.
DR   HOGENOM; CLU_025066_1_0_1; -.
DR   InParanoid; Q14B46; -.
DR   OMA; TDLCFEN; -.
DR   OrthoDB; 5393023at2759; -.
DR   PhylomeDB; Q14B46; -.
DR   TreeFam; TF331476; -.
DR   BioGRID-ORCS; 170799; 2 hits in 78 CRISPR screens.
DR   PRO; PR:Q14B46; -.
DR   Proteomes; UP000000589; Chromosome 10.
DR   RNAct; Q14B46; Protein.
DR   Bgee; ENSMUSG00000037846; Expressed in right lung lobe and 117 other cell types or tissues.
DR   ExpressionAtlas; Q14B46; baseline and differential.
DR   Genevisible; Q14B46; MM.
DR   GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR   GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR   GO; GO:0005886; C:plasma membrane; IDA:MGI.
DR   GO; GO:0030097; P:hemopoiesis; IDA:MGI.
DR   GO; GO:2001243; P:negative regulation of intrinsic apoptotic signaling pathway; ISS:UniProtKB.
DR   GO; GO:0008284; P:positive regulation of cell population proliferation; IDA:MGI.
DR   GO; GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:UniProtKB.
DR   GO; GO:1901224; P:positive regulation of non-canonical NF-kappaB signal transduction; ISS:UniProtKB.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   CDD; cd13249; PH_rhotekin2; 1.
DR   Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR   InterPro; IPR012966; AHD.
DR   InterPro; IPR011072; HR1_rho-bd.
DR   InterPro; IPR011993; PH-like_dom_sf.
DR   InterPro; IPR001849; PH_domain.
DR   PANTHER; PTHR21538; ANILLIN/RHOTEKIN RTKN; 1.
DR   PANTHER; PTHR21538:SF21; RHOTEKIN-2; 1.
DR   Pfam; PF08174; Anillin; 1.
DR   Pfam; PF00169; PH; 1.
DR   SMART; SM00742; Hr1; 1.
DR   SMART; SM00233; PH; 1.
DR   SUPFAM; SSF50729; PH domain-like; 1.
DR   PROSITE; PS50003; PH_DOMAIN; 1.
DR   PROSITE; PS51860; REM_1; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; Coiled coil; Reference proteome.
FT   CHAIN           1..604
FT                   /note="Rhotekin-2"
FT                   /id="PRO_0000309327"
FT   DOMAIN          1..74
FT                   /note="REM-1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01207"
FT   DOMAIN          281..387
FT                   /note="PH"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00145"
FT   REGION          481..590
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          53..79
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        510..541
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   VAR_SEQ         80..82
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000303|PubMed:16141072"
FT                   /id="VSP_029140"
FT   CONFLICT        408
FT                   /note="R -> L (in Ref. 1; BAC27204)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        449
FT                   /note="R -> G (in Ref. 2; AAI16342/AAI16343)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        484
FT                   /note="I -> T (in Ref. 2; AAI16342/AAI16343)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        515
FT                   /note="R -> S (in Ref. 2; AAI16342/AAI16343)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        533..534
FT                   /note="SS -> PL (in Ref. 2; AAI16342/AAI16343)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        541..542
FT                   /note="SP -> LL (in Ref. 2; AAI16342/AAI16343)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        560
FT                   /note="A -> G (in Ref. 1; BAC27204)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   604 AA;  66962 MW;  9DC76A294B1DE49B CRC64;
     MEGQLLRGLA AQQDCSIREK IDLEIRMREG IWKLLSLSTK KDQVLHAVKN LMVCSARIQA
     YTAELQKSKE EIANQTGARL VLDSSSENKE GESCRGKIAL SDIRIPLMWK DSDHFSNKEC
     TQRFAIFCLF RMGAQVFDTD MVIVDQTVTD ICFENVTIFN EAGPDFQIKI EVYSCSAEES
     SLTNTPRKLA KKLKTSISKA TGRKISAALQ EESPEACLLA GSVAGAKYHL LAHTTLTLEN
     AGDCFKTHNL SVHGDEECSF WLPLYGNVCC RLVAQPACMA ADAFAGFLNE QQTGKGLVGW
     RRLYCALRGG KLRCFYGPEE IEAKVEPALV VPIDKETRIQ AVEKDSKKMH CFSVLSTAAG
     RAVSHIFAAD SLADFQEWMG AFRQHFFDLS QWKHCCEELM RIEIMSPRKP PLFLAKEATS
     VYYDMSIDSP VKLESVTDII QKKIGETNRQ FLIGRDDQSA APPWAAVFDG NHEMVIEKKV
     LSPIGEPAPD GKRKKRRAPL PPTDQPPFCI KTQGRANQSK DSATQAGVSG ASSSPSDPRL
     SPPTHHLQKP VAAPRKLLPA RKNSSADIGH TDTKTSLDAK PVPVPRQKSI RDILDPRSWL
     QAQV
//
DBGET integrated database retrieval system